Information for 11-GACAAAATTSTAATCT (Motif 13)

C T A G C T G A G T A C C G T A C T G A G T C A C T G A G C A T C A G T A T C G G C A T C G T A C T G A G A C T G T A C A G C T
Reverse Opposite:
C T G A A C T G C T G A G A C T C G A T C G T A A T G C G T C A C G T A A G C T A C G T A G C T G A C T C A T G A G C T A G T C
p-value:1e-10
log p-value:-2.324e+01
Information Content per bp:1.667
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.42%
Number of Background Sequences with motif31.9
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets42.6 +/- 25.4bp
Average Position of motif in Background44.8 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GACAAAATTSTAATCT
GAAAAAATTGCAAGG-
 C T A G C T G A G T A C C G T A C T G A G T C A C T G A G C A T C A G T A T C G G C A T C G T A C T G A G A C T G T A C A G C T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:2
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GACAAAATTSTAATCT-
GGAAAAATTGTTAGGAA
 C T A G C T G A G T A C C G T A C T G A G T C A C T G A G C A T C A G T A T C G G C A T C G T A C T G A G A C T G T A C A G C T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

LIN54/MA0619.1/Jaspar

Match Rank:3
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:GACAAAATTSTAATCT
-----NATTCAAAT--
 C T A G C T G A G T A C C G T A C T G A G T C A C T G A G C A T C A G T A T C G G C A T C G T A C T G A G A C T G T A C A G C T
A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T

PB0079.1_Sry_1/Jaspar

Match Rank:4
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GACAAAATTSTAATCT--
--TATAATTATAATATTC
 C T A G C T G A G T A C C G T A C T G A G T C A C T G A G C A T C A G T A T C G G C A T C G T A C T G A G A C T G T A C A G C T A C G T A C G T
A C G T A C G T A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:5
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GACAAAATTSTAATCT
---GAAAMTGAAACT-
 C T A G C T G A G T A C C G T A C T G A G T C A C T G A G C A T C A G T A T C G G C A T C G T A C T G A G A C T G T A C A G C T
A C G T A C G T A C G T C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:6
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GACAAAATTSTAATCT-
---AAAATTGTTATGAA
 C T A G C T G A G T A C C G T A C T G A G T C A C T G A G C A T C A G T A T C G G C A T C G T A C T G A G A C T G T A C A G C T A C G T
A C G T A C G T A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

PB0194.1_Zbtb12_2/Jaspar

Match Rank:7
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:GACAAAATTSTAATCT--
---AGNGTTCTAATGANN
 C T A G C T G A G T A C C G T A C T G A G T C A C T G A G C A T C A G T A T C G G C A T C G T A C T G A G A C T G T A C A G C T A C G T A C G T
A C G T A C G T A C G T G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A

ONECUT3/MA0757.1/Jaspar

Match Rank:8
Score:0.49
Offset:2
Orientation:forward strand
Alignment:GACAAAATTSTAATCT
--AAAAAATCAATAAT
 C T A G C T G A G T A C C G T A C T G A G T C A C T G A G C A T C A G T A T C G G C A T C G T A C T G A G A C T G T A C A G C T
A C G T A C G T T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T

PB0174.1_Sox30_2/Jaspar

Match Rank:9
Score:0.49
Offset:2
Orientation:forward strand
Alignment:GACAAAATTSTAATCT--
--TAAGATTATAATACGG
 C T A G C T G A G T A C C G T A C T G A G T C A C T G A G C A T C A G T A T C G G C A T C G T A C T G A G A C T G T A C A G C T A C G T A C G T
A C G T A C G T G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

PB0171.1_Sox18_2/Jaspar

Match Rank:10
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-GACAAAATTSTAATCT
GGACTGAATTCATGCC-
 A C G T C T A G C T G A G T A C C G T A C T G A G T C A C T G A G C A T C A G T A T C G G C A T C G T A C T G A G A C T G T A C A G C T
C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C A C G T