Information for 7-GRKACKAAACCAT (Motif 9)

A C T G C T A G A C T G G T C A A G T C A C G T C G T A G T C A C G T A A G T C A G T C C G T A A C G T
Reverse Opposite:
C G T A C G A T A C T G A C T G A C G T A C G T A C G T T G C A A C T G A C G T G T A C A G T C A G T C
p-value:1e-10
log p-value:-2.401e+01
Information Content per bp:1.881
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.2 +/- 27.0bp
Average Position of motif in Background31.6 +/- 24.3bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0034.1_Irf4_1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GRKACKAAACCAT-
CGTATCGAAACCAAA
 A C G T A C T G C T A G A C T G G T C A A G T C A C G T C G T A G T C A C G T A A G T C A G T C C G T A A C G T A C G T
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A

PB0036.1_Irf6_1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GRKACKAAACCAT---
CTGATCGAAACCAAAGT
 A C G T A C T G C T A G A C T G G T C A A G T C A C G T C G T A G T C A C G T A A G T C A G T C C G T A A C G T A C G T A C G T A C G T
G T A C C G A T C A T G C T G A G A C T G A T C C T A G T C G A C G T A C G T A T A G C A G T C T C G A T G C A C G T A C A T G C G A T

Foxq1/MA0040.1/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GRKACKAAACCAT-
---AATAAACAATN
 A C T G C T A G A C T G G T C A A G T C A C G T C G T A G T C A C G T A A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A

PB0035.1_Irf5_1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GRKACKAAACCAT
ATAAACCGAAACCAA
 A C G T A C G T A C T G C T A G A C T G G T C A A G T C A C G T C G T A G T C A C G T A A G T C A G T C C G T A A C G T
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GRKACKAAACCAT
--ACTGAAACCA-
 A C T G C T A G A C T G G T C A A G T C A C G T C G T A G T C A C G T A A G T C A G T C C G T A A C G T
A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T

PH0037.1_Hdx/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GRKACKAAACCAT----
AAGGCGAAATCATCGCA
 A C T G C T A G A C T G G T C A A G T C A C G T C G T A G T C A C G T A A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:7
Score:0.58
Offset:6
Orientation:forward strand
Alignment:GRKACKAAACCAT---
------AAACMATTAN
 A C T G C T A G A C T G G T C A A G T C A C G T C G T A G T C A C G T A A G T C A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G

Sox5/MA0087.1/Jaspar

Match Rank:8
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:GRKACKAAACCAT
------NAACAAT
 A C T G C T A G A C T G G T C A A G T C A C G T C G T A G T C A C G T A A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GRKACKAAACCAT
GAGAACCGAAACTG-
 A C G T A C G T A C T G C T A G A C T G G T C A A G T C A C G T C G T A G T C A C G T A A G T C A G T C C G T A A C G T
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:10
Score:0.55
Offset:6
Orientation:forward strand
Alignment:GRKACKAAACCAT---
------AAACCACANN
 A C T G C T A G A C T G G T C A A G T C A C G T C G T A G T C A C G T A A G T C A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A