Information for 6-TTGCAAAGCTAGG (Motif 8)

A C G T A C G T A C T G A G T C C G T A C G T A C G T A A C T G A G T C C G A T C G T A C T A G C T A G
Reverse Opposite:
A G T C A G T C A C G T C G T A C T A G G T A C A C G T C G A T A C G T A C T G A G T C C G T A C G T A
p-value:1e-11
log p-value:-2.621e+01
Information Content per bp:1.875
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets68.0 +/- 21.6bp
Average Position of motif in Background48.6 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TTGCAAAGCTAGG
CAATTGCAAAAATAT-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A A C T G A G T C C G A T C G T A C T A G C T A G
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TTGCAAAGCTAGG
ATTGCACAATA---
 A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A A C T G A G T C C G A T C G T A C T A G C T A G
T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A A C G T A C G T A C G T

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TTGCAAAGCTAGG
ATTTGCATAACAATG
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A A C T G A G T C C G A T C G T A C T A G C T A G
G C T A G C A T G A C T G C A T T C A G G T A C G C T A G C A T C T G A G C T A T A G C G C T A C T G A C G A T C T A G

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TTGCAAAGCTAGG
ATTTGCATAT-----
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A A C T G A G T C C G A T C G T A C T A G C T A G
G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T A C G T A C G T A C G T A C G T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTGCAAAGCTAGG
ATTTGCATAACAAAG
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A A C T G A G T C C G A T C G T A C T A G C T A G
G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G

POU2F2/MA0507.1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTGCAAAGCTAGG
ATATGCAAATNNN--
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A A C T G A G T C C G A T C G T A C T A G C T A G
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TTGCAAAGCTAGG
NATGTTGCAA-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A A C T G A G T C C G A T C G T A C T A G C T A G
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TTGCAAAGCTAGG
NNCGTTGCTATGGNN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A A C T G A G T C C G A T C G T A C T A G C T A G
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TTGCAAAGCTAGG
TTATGCAAAT-----
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A A C T G A G T C C G A T C G T A C T A G C T A G
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TTGCAAAGCTAGG
ATTTGCATA------
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A A C T G A G T C C G A T C G T A C T A G C T A G
G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T