Information for 4-TCTTTGGCAATGGTVA (Motif 5)

C G A T A T G C A C G T C G A T A C G T A C T G A C T G A G T C C G T A C G T A A C G T C A T G A T C G C G A T T A C G C T G A
Reverse Opposite:
A G C T A T G C C G T A A T G C G T A C C G T A A C G T C G A T A C T G A G T C A G T C C G T A C G T A C G T A A T C G C G T A
p-value:1e-14
log p-value:-3.229e+01
Information Content per bp:1.814
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets69.2 +/- 19.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TCTTTGGCAATGGTVA
--NTTGGCANN-----
 C G A T A T G C A C G T C G A T A C G T A C T G A C T G A G T C C G T A C G T A A C G T C A T G A T C G C G A T T A C G C T G A
A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TCTTTGGCAATGGTVA
---TTGGCA-------
 C G A T A T G C A C G T C G A T A C G T A C T G A C T G A G T C C G T A C G T A A C G T C A T G A T C G C G A T T A C G C T G A
A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TCTTTGGCAATGGTVA
-NNTTGGCANN-----
 C G A T A T G C A C G T C G A T A C G T A C T G A C T G A G T C C G T A C G T A A C G T C A T G A T C G C G A T T A C G C T G A
A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TCTTTGGCAATGGTVA
--CTTGGCAA------
 C G A T A T G C A C G T C G A T A C G T A C T G A C T G A G T C C G T A C G T A A C G T C A T G A T C G C G A T T A C G C T G A
A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TCTTTGGCAATGGTVA
NATTGTGCAAT-----
 C G A T A T G C A C G T C G A T A C G T A C T G A C T G A G T C C G T A C G T A A C G T C A T G A T C G C G A T T A C G C T G A
C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T A C G T A C G T A C G T A C G T A C G T

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TCTTTGGCAATGGTVA
-GTTGCGCAAT-----
 C G A T A T G C A C G T C G A T A C G T A C T G A C T G A G T C C G T A C G T A A C G T C A T G A T C G C G A T T A C G C T G A
A C G T T C A G A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TCTTTGGCAATGGTVA
ANATTTTTGCAANTN---
 A C G T A C G T C G A T A T G C A C G T C G A T A C G T A C T G A C T G A G T C C G T A C G T A A C G T C A T G A T C G C G A T T A C G C T G A
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TCTTTGGCAATGGTVA
TGATTGGCTANN----
 C G A T A T G C A C G T C G A T A C G T A C T G A C T G A G T C C G T A C G T A A C G T C A T G A T C G C G A T T A C G C T G A
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T A C G T A C G T A C G T A C G T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TCTTTGGCAATGGTVA
--TTATGCAAT-----
 C G A T A T G C A C G T C G A T A C G T A C T G A C T G A G T C C G T A C G T A A C G T C A T G A T C G C G A T T A C G C T G A
A C G T A C G T C G A T C A G T C T G A A G C T C T A G G A T C T G C A C T G A A G C T A C G T A C G T A C G T A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TCTTTGGCAATGGTVA
--TGGGGCAAAGGTCA
 C G A T A T G C A C G T C G A T A C G T A C T G A C T G A G T C C G T A C G T A A C G T C A T G A T C G C G A T T A C G C T G A
A C G T A C G T C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A