Information for 5-TCTGGGCACG (Motif 6)

A C G T A G T C C G A T A C T G A C T G A C T G T G A C C G T A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T A C T G G T A C A G T C A G T C C G T A A C T G C G T A
p-value:1e-13
log p-value:-2.997e+01
Information Content per bp:1.905
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.60%
Number of Background Sequences with motif38.5
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets49.2 +/- 28.5bp
Average Position of motif in Background57.6 +/- 32.6bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--TCTGGGCACG
WDNCTGGGCA--
 A C G T A C G T A C G T A G T C C G A T A C T G A C T G A C T G T G A C C G T A A G T C A C T G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TCTGGGCACG---
NNNNTTGGGCACNNCN
 A C G T A C G T A C G T A C G T A G T C C G A T A C T G A C T G A C T G T G A C C G T A A G T C A C T G A C G T A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

HIC2/MA0738.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TCTGGGCACG
NGTGGGCAT-
 A C G T A G T C C G A T A C T G A C T G A C T G T G A C C G T A A G T C A C T G
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TCTGGGCACG
TNNGGGCAG-
 A C G T A G T C C G A T A C T G A C T G A C T G T G A C C G T A A G T C A C T G
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TCTGGGCACG----
NNTTTGCACACGGCCC
 A C G T A C G T A C G T A G T C C G A T A C T G A C T G A C T G T G A C C G T A A G T C A C T G A C G T A C G T A C G T A C G T
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.62
Offset:-7
Orientation:reverse strand
Alignment:-------TCTGGGCACG
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C T G A C T G A C T G T G A C C G T A A G T C A C T G
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:7
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TCTGGGCACG--
----BGCACGTA
 A C G T A G T C C G A T A C T G A C T G A C T G T G A C C G T A A G T C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TCTGGGCACG
TTCTTGGAAAN
 A C G T A C G T A G T C C G A T A C T G A C T G A C T G T G A C C G T A A G T C A C T G
A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:9
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TCTGGGCACG---
-----GCACGTAY
 A C G T A G T C C G A T A C T G A C T G A C T G T G A C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:10
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TCTGGGCACG---
-----GCACGTNC
 A C G T A G T C C G A T A C T G A C T G A C T G T G A C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C