Information for 1-TGKCAGCMTGGGC (Motif 3)

A C G T A C T G A C T G A G T C C G T A A C T G A G T C G T A C A C G T A C T G A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A G T C C G T A A C T G A C T G A G T C A C G T A C T G G T A C A G T C C G T A
p-value:1e-12
log p-value:-2.811e+01
Information Content per bp:1.920
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.2 +/- 20.7bp
Average Position of motif in Background72.0 +/- 13.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGKCAGCMTGGGC
VBTGWCAGCB-----
 A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A G T C G T A C A C G T A C T G A C T G A C T G A G T C
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.62
Offset:4
Orientation:forward strand
Alignment:TGKCAGCMTGGGC-
----WDNCTGGGCA
 A C G T A C T G A C T G A G T C C G T A A C T G A G T C G T A C A C G T A C T G A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

EGR2/MA0472.2/Jaspar

Match Rank:3
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TGKCAGCMTGGGC--
----TGCGTGGGCGT
 A C G T A C T G A C T G A G T C C G T A A C T G A G T C G T A C A C G T A C T G A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G A C T T C A G G T A C T C A G A C G T T C A G A C T G T C A G G A T C T C A G C A G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGKCAGCMTGGGC
YTGWCADY------
 A C G T A C G T A C T G A C T G A G T C C G T A A C T G A G T C G T A C A C G T A C T G A C T G A C T G A G T C
G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGKCAGCMTGGGC
TTGACAGC------
 A C G T A C G T A C T G A C T G A G T C C G T A A C T G A G T C G T A C A C G T A C T G A C T G A C T G A G T C
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGKCAGCMTGGGC
DCTCAGCAGG---
 A C G T A C T G A C T G A G T C C G T A A C T G A G T C G T A C A C G T A C T G A C T G A C T G A G T C
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TGKCAGCMTGGGC
TGAGTCAGCA-----
 A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A G T C G T A C A C G T A C T G A C T G A C T G A G T C
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGKCAGCMTGGGC
TGTCANYT-----
 A C G T A C T G A C T G A G T C C G T A A C T G A G T C G T A C A C G T A C T G A C T G A C T G A G T C
A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TGKCAGCMTGGGC
CTTGGCAA-------
 A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A G T C G T A C A C G T A C T G A C T G A C T G A G T C
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TGKCAGCMTGGGC
NTGTCAN-------
 A C G T A C G T A C T G A C T G A G T C C G T A A C T G A G T C G T A C A C G T A C T G A C T G A C T G A G T C
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T