Information for 12-CCTCTAGCCTCTGAGG (Motif 22)

G A T C A G T C C G A T A T G C C A G T C T G A C A T G T A G C G T A C G A C T A G T C G C A T T A C G C T G A T C A G A C T G
Reverse Opposite:
T A G C A G T C A G C T A T G C C G T A T C A G C G T A A C T G A T C G G A T C A G C T G C T A A T C G C G T A C T A G C T A G
p-value:1e-8
log p-value:-2.040e+01
Information Content per bp:1.666
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.45%
Number of Background Sequences with motif45.8
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets57.1 +/- 26.5bp
Average Position of motif in Background43.0 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)3.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR2C2/MA0504.1/Jaspar

Match Rank:1
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CCTCTAGCCTCTGAGG
TGACCTCTGACCCCN----
 A C G T A C G T A C G T G A T C A G T C C G A T A T G C C A G T C T G A C A T G T A G C G T A C G A C T A G T C G C A T T A C G C T G A T C A G A C T G
G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T A C G T A C G T A C G T A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:2
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CCTCTAGCCTCTGAGG
TGACCTTTGACCTC-----
 A C G T A C G T A C G T G A T C A G T C C G A T A T G C C A G T C T G A C A T G T A G C G T A C G A C T A G T C G C A T T A C G C T G A T C A G A C T G
G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C A C G T A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CCTCTAGCCTCTGAGG
-----AGCCACTCAAG
 G A T C A G T C C G A T A T G C C A G T C T G A C A T G T A G C G T A C G A C T A G T C G C A T T A C G C T G A T C A G A C T G
A C G T A C G T A C G T A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CCTCTAGCCTCTGAGG---
GCCTCCTCCMTCWGACTGKS
 A C G T G A T C A G T C C G A T A T G C C A G T C T G A C A T G T A G C G T A C G A C T A G T C G C A T T A C G C T G A T C A G A C T G A C G T A C G T A C G T
T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:CCTCTAGCCTCTGAGG--
------TCCCCTGGGGAC
 G A T C A G T C C G A T A T G C C A G T C T G A C A T G T A G C G T A C G A C T A G T C G C A T T A C G C T G A T C A G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-CCTCTAGCCTCTGAGG
GGCTCYAKCAYC-----
 A C G T G A T C A G T C C G A T A T G C C A G T C T G A C A T G T A G C G T A C G A C T A G T C G C A T T A C G C T G A T C A G A C T G
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C A C G T A C G T A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.49
Offset:5
Orientation:forward strand
Alignment:CCTCTAGCCTCTGAGG-
-----ATGCCCTGAGGC
 G A T C A G T C C G A T A T G C C A G T C T G A C A T G T A G C G T A C G A C T A G T C G C A T T A C G C T G A T C A G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:CCTCTAGCCTCTGAGG
---CTGACCTTTG---
 G A T C A G T C C G A T A T G C C A G T C T G A C A T G T A G C G T A C G A C T A G T C G C A T T A C G C T G A T C A G A C T G
A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:9
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:CCTCTAGCCTCTGAGG
CNNTTGACCTTTG---
 G A T C A G T C C G A T A T G C C A G T C T G A C A T G T A G C G T A C G A C T A G T C G C A T T A C G C T G A T C A G A C T G
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---CCTCTAGCCTCTGAGG
TGACCTTTGCCCTA-----
 A C G T A C G T A C G T G A T C A G T C C G A T A T G C C A G T C T G A C A T G T A G C G T A C G A C T A G T C G C A T T A C G C T G A T C A G A C T G
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A A C G T A C G T A C G T A C G T A C G T