Information for 9-CASRCYACCCTGACCT (Motif 15)

A G T C G T C A T A G C C T G A A G T C A G T C G T C A A G T C A G T C A G T C G A C T A T C G C G T A A G T C G T A C A C G T
Reverse Opposite:
C G T A A C T G A C T G A C G T A T G C C G T A A C T G A C T G C T A G A C G T T C A G A C T G G A C T A T C G A C G T A C T G
p-value:1e-9
log p-value:-2.265e+01
Information Content per bp:1.756
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.2 +/- 28.6bp
Average Position of motif in Background46.5 +/- 17.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZEB1/MA0103.2/Jaspar

Match Rank:1
Score:0.62
Offset:8
Orientation:forward strand
Alignment:CASRCYACCCTGACCT-
--------CCTCACCTG
 A G T C G T C A T A G C C T G A A G T C A G T C G T C A A G T C A G T C A G T C G A C T A T C G C G T A A G T C G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:CASRCYACCCTGACCT-
------NNACTTACCTN
 A G T C G T C A T A G C C T G A A G T C A G T C G T C A A G T C A G T C A G T C G A C T A T C G C G T A A G T C G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:3
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CASRCYACCCTGACCT
----TGACCTTGACCT
 A G T C G T C A T A G C C T G A A G T C A G T C G T C A A G T C A G T C A G T C G A C T A T C G C G T A A G T C G T A C A C G T
A C G T A C G T A C G T A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:4
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CASRCYACCCTGACCT
----TGACCTTGACCT
 A G T C G T C A T A G C C T G A A G T C A G T C G T C A A G T C A G T C A G T C G A C T A T C G C G T A A G T C G T A C A C G T
A C G T A C G T A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T

ESR2/MA0258.2/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CASRCYACCCTGACCT
-AGGNCANNGTGACCT
 A G T C G T C A T A G C C T G A A G T C A G T C G T C A A G T C A G T C A G T C G A C T A T C G C G T A A G T C G T A C A C G T
A C G T C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.57
Offset:10
Orientation:reverse strand
Alignment:CASRCYACCCTGACCT--
----------TGACCTYA
 A G T C G T C A T A G C C T G A A G T C A G T C G T C A A G T C A G T C A G T C G A C T A T C G C G T A A G T C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

RORA/MA0071.1/Jaspar

Match Rank:7
Score:0.57
Offset:10
Orientation:reverse strand
Alignment:CASRCYACCCTGACCT----
----------TGACCTTGAT
 A G T C G T C A T A G C C T G A A G T C A G T C G T C A A G T C A G T C A G T C G A C T A T C G C G T A A G T C G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:8
Score:0.56
Offset:10
Orientation:reverse strand
Alignment:CASRCYACCCTGACCT
----------TGACCT
 A G T C G T C A T A G C C T G A A G T C A G T C G T C A A G T C A G T C A G T C G A C T A T C G C G T A A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.55
Offset:9
Orientation:forward strand
Alignment:CASRCYACCCTGACCT---
---------NTGACCTTGA
 A G T C G T C A T A G C C T G A A G T C A G T C G T C A A G T C A G T C A G T C G A C T A T C G C G T A A G T C G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:10
Score:0.55
Offset:10
Orientation:reverse strand
Alignment:CASRCYACCCTGACCT--
----------TGACCYCT
 A G T C G T C A T A G C C T G A A G T C A G T C G T C A A G T C A G T C A G T C G A C T A T C G C G T A A G T C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T