Information for 7-GGGGTGAGMAGARTCA (Motif 11)

A C T G T A C G T C A G A T C G C A G T A C T G T C G A T A C G T G C A C G T A C T A G T C G A T C G A A C G T A G T C G C T A
Reverse Opposite:
C G A T T A C G T G C A A G C T A G C T G A T C A C G T A C G T A G T C A C G T A G T C G T C A A T G C A G T C A G T C G T A C
p-value:1e-10
log p-value:-2.401e+01
Information Content per bp:1.680
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.60%
Number of Background Sequences with motif42.7
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets63.3 +/- 25.8bp
Average Position of motif in Background48.7 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SREBF1/MA0595.1/Jaspar

Match Rank:1
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GGGGTGAGMAGARTCA
GTGGGGTGAT--------
 A C G T A C G T A C T G T A C G T C A G A T C G C A G T A C T G T C G A T A C G T G C A C G T A C T A G T C G A T C G A A C G T A G T C G C T A
T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GGGGTGAGMAGARTCA
ATGGGGTGAT--------
 A C G T A C G T A C T G T A C G T C A G A T C G C A G T A C T G T C G A T A C G T G C A C G T A C T A G T C G A T C G A A C G T A G T C G C T A
T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:3
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GGGGTGAGMAGARTCA
ATGGGGTGAT--------
 A C G T A C G T A C T G T A C G T C A G A T C G C A G T A C T G T C G A T A C G T G C A C G T A C T A G T C G A T C G A A C G T A G T C G C T A
T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GGGGTGAGMAGARTCA
GAAAAGGTGTGAAAATT--
 A C G T A C G T A C G T A C T G T A C G T C A G A T C G C A G T A C T G T C G A T A C G T G C A C G T A C T A G T C G A T C G A A C G T A G T C G C T A
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T A C G T A C G T

GATA2/MA0036.2/Jaspar

Match Rank:5
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GGGGTGAGMAGARTCA
--NCAGATAAGAANNN
 A C T G T A C G T C A G A T C G C A G T A C T G T C G A T A C G T G C A C G T A C T A G T C G A T C G A A C G T A G T C G C T A
A C G T A C G T C G T A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A C G T A G A C T G A T C G C A T

PB0107.1_Ascl2_2/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GGGGTGAGMAGARTCA
NATNGGGNGGGGANAN---
 A C G T A C G T A C G T A C T G T A C G T C A G A T C G C A G T A C T G T C G A T A C G T G C A C G T A C T A G T C G A T C G A A C G T A G T C G C T A
C T G A T G C A G A C T T C G A C T A G C T A G T C A G G A T C A C T G C A T G A T C G C A T G G C T A A C G T C T G A T A C G A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GGGGTGAGMAGARTCA
---GGGAGGACNG---
 A C T G T A C G T C A G A T C G C A G T A C T G T C G A T A C G T G C A C G T A C T A G T C G A T C G A A C G T A G T C G C T A
A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GGGGTGAGMAGARTCA
-AGGTGTTAAT-----
 A C T G T A C G T C A G A T C G C A G T A C T G T C G A T A C G T G C A C G T A C T A G T C G A T C G A A C G T A G T C G C T A
A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T A C G T A C G T A C G T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GGGGTGAGMAGARTCA
GTGGCGTGACNG------
 A C G T A C G T A C T G T A C G T C A G A T C G C A G T A C T G T C G A T A C G T G C A C G T A C T A G T C G A T C G A A C G T A G T C G C T A
T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G A C G T A C G T A C G T A C G T A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GGGGTGAGMAGARTCA
AGGTGTGA---------
 A C G T A C T G T A C G T C A G A T C G C A G T A C T G T C G A T A C G T G C A C G T A C T A G T C G A T C G A A C G T A G T C G C T A
C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T