Information for 13-CTACATTCCATTGTTG (Motif 28)

A G T C A C G T C T G A A G T C T C G A A C G T A C G T A G T C A G T C T G C A A C G T A C G T A C T G A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A A G T C C G T A C G T A A C G T C T A G A C T G C G T A C G T A A C G T C T A G A G C T C G T A A C T G
p-value:1e-2
log p-value:-5.579e+00
Information Content per bp:1.929
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets89.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0070.1_Sox30_1/Jaspar

Match Rank:1
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:CTACATTCCATTGTTG---
---ANNTCCATTGTTCNNN
 A G T C A C G T C T G A A G T C T C G A A C G T A C G T A G T C A G T C T G C A A C G T A C G T A C T G A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.65
Offset:6
Orientation:forward strand
Alignment:CTACATTCCATTGTTG
------NCCATTGTTC
 A G T C A C G T C T G A A G T C T C G A A C G T A C G T A G T C A G T C T G C A A C G T A C G T A C T G A C G T A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C

SOX9/MA0077.1/Jaspar

Match Rank:3
Score:0.65
Offset:7
Orientation:forward strand
Alignment:CTACATTCCATTGTTG
-------CCATTGTTC
 A G T C A C G T C T G A A G T C T C G A A C G T A C G T A G T C A G T C T G C A A C G T A C G T A C T G A C G T A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.65
Offset:7
Orientation:forward strand
Alignment:CTACATTCCATTGTTG-
-------CCATTGTTYB
 A G T C A C G T C T G A A G T C T C G A A C G T A C G T A G T C A G T C T G C A A C G T A C G T A C T G A C G T A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

Sox2/MA0143.3/Jaspar

Match Rank:5
Score:0.65
Offset:7
Orientation:forward strand
Alignment:CTACATTCCATTGTTG
-------CCTTTGTT-
 A G T C A C G T C T G A A G T C T C G A A C G T A C G T A G T C A G T C T G C A A C G T A C G T A C T G A C G T A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:6
Score:0.64
Offset:5
Orientation:forward strand
Alignment:CTACATTCCATTGTTG-----
-----TTCAATTGTTCTAAAA
 A G T C A C G T C T G A A G T C T C G A A C G T A C G T A G T C A G T C T G C A A C G T A C G T A C T G A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

TEAD1/MA0090.2/Jaspar

Match Rank:7
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CTACATTCCATTGTTG
-CACATTCCAT-----
 A G T C A C G T C T G A A G T C T C G A A C G T A C G T A G T C A G T C T G C A A C G T A C G T A C T G A C G T A C G T A C T G
A C G T G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T A C G T A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:8
Score:0.63
Offset:7
Orientation:forward strand
Alignment:CTACATTCCATTGTTG
-------CCWTTGTY-
 A G T C A C G T C T G A A G T C T C G A A C G T A C G T A G T C A G T C T G C A A C G T A C G T A C T G A C G T A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:9
Score:0.63
Offset:7
Orientation:forward strand
Alignment:CTACATTCCATTGTTG-
-------CCATTGTTNY
 A G T C A C G T C T G A A G T C T C G A A C G T A C G T A G T C A G T C T G C A A C G T A C G T A C T G A C G T A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

TEAD4/MA0809.1/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CTACATTCCATTGTTG
-CACATTCCAT-----
 A G T C A C G T C T G A A G T C T C G A A C G T A C G T A G T C A G T C T G C A A C G T A C G T A C T G A C G T A C G T A C T G
A C G T G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T A C G T A C G T A C G T A C G T A C G T