Information for 2-TGCATTGTGCTGT (Motif 2)

A C G T A C T G A G T C C G T A A C G T A C G T A C T G A G C T A C T G A T G C A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A A T C G A G T C C T G A A G T C C G T A C G T A A C G T A C T G A G T C C G T A
p-value:1e-11
log p-value:-2.552e+01
Information Content per bp:1.962
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif2.26%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.0 +/- 35.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17/MA0078.1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TGCATTGTGCTGT
CTCATTGTC----
 A C G T A C T G A G T C C G T A A C G T A C G T A C T G A G C T A C T G A T G C A C G T A C T G A C G T
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TGCATTGTGCTGT
-CCWTTGTYYB--
 A C G T A C T G A G T C C G T A A C G T A C G T A C T G A G C T A C T G A T G C A C G T A C T G A C G T
A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGCATTGTGCTGT
-CCATTGTTTT--
 A C G T A C T G A G T C C G T A A C G T A C G T A C T G A G C T A C T G A T G C A C G T A C T G A C G T
A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TGCATTGTGCTGT
--CTTTGT-----
 A C G T A C T G A G T C C G T A A C G T A C G T A C T G A G C T A C T G A T G C A C G T A C T G A C G T
A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGCATTGTGCTGT
-CCATTGTTNY--
 A C G T A C T G A G T C C G T A A C G T A C G T A C T G A G C T A C T G A T G C A C G T A C T G A C G T
A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TGCATTGTGCTGT
-CCATTGTTYB--
 A C G T A C T G A G T C C G T A A C G T A C G T A C T G A G C T A C T G A T G C A C G T A C T G A C G T
A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TGCATTGTGCTGT--
CNNNTATTGTTCNNNNN
 A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A C T G A G C T A C T G A T G C A C G T A C T G A C G T A C G T A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

PB0074.1_Sox8_1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TGCATTGTGCTGT-
GTATCTATTGTTCTTTA
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A C T G A G C T A C T G A T G C A C G T A C T G A C G T A C G T
C A G T C A G T C G T A C G A T A G C T G C A T C G T A G A C T C G A T T C A G C G A T G A C T G T A C G C A T C A G T C G A T C G T A

PB0070.1_Sox30_1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TGCATTGTGCTGT
ANNTCCATTGTTCNNN
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A C T G A G C T A C T G A T G C A C G T A C T G A C G T
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T

PB0173.1_Sox21_2/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TGCATTGTGCTGT--
AATCAATTGTTCCGCTA
 A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A C T G A G C T A C T G A T G C A C G T A C T G A C G T A C G T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A