Information for 5-CTTGTTTATT (Motif 2)

A T G C C G A T A G C T C T A G C A G T G C A T A C G T C G T A A C G T C G A T
Reverse Opposite:
G C T A T G C A G C A T T G C A C G T A G C T A G A T C T C G A G C T A T A C G
p-value:1e-14
log p-value:-3.348e+01
Information Content per bp:1.600
Number of Target Sequences with motif105.0
Percentage of Target Sequences with motif11.65%
Number of Background Sequences with motif2154.0
Percentage of Background Sequences with motif5.02%
Average Position of motif in Targets47.4 +/- 25.6bp
Average Position of motif in Background50.2 +/- 33.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxj2/MA0614.1/Jaspar

Match Rank:1
Score:0.88
Offset:1
Orientation:reverse strand
Alignment:CTTGTTTATT
-TTGTTTAC-
 A T G C C G A T A G C T C T A G C A G T G C A T A C G T C G T A A C G T C G A T
A C G T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C A C G T

FOXG1/MA0613.1/Jaspar

Match Rank:2
Score:0.86
Offset:1
Orientation:reverse strand
Alignment:CTTGTTTATT
-TTGTTTAC-
 A T G C C G A T A G C T C T A G C A G T G C A T A C G T C G T A A C G T C G A T
A C G T C G A T A C G T A C T G A C G T A C G T A C G T C G T A A G T C A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:3
Score:0.86
Offset:2
Orientation:forward strand
Alignment:CTTGTTTATT-
--TGTTTATTT
 A T G C C G A T A G C T C T A G C A G T G C A T A C G T C G T A A C G T C G A T A C G T
A C G T A C G T G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T

Foxq1/MA0040.1/Jaspar

Match Rank:4
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-CTTGTTTATT
TATTGTTTATT
 A C G T A T G C C G A T A G C T C T A G C A G T G C A T A C G T C G T A A C G T C G A T
G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T

FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer

Match Rank:5
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-CTTGTTTATT
NVWTGTTTAC-
 A C G T A T G C C G A T A G C T C T A G C A G T G C A T A C G T C G T A A C G T C G A T
A G C T T G A C C G A T C G A T C T A G A C G T C A G T C A G T G C T A A G T C A C G T

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:6
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:CTTGTTTATT--
CBTGTTTAYAWW
 A T G C C G A T A G C T C T A G C A G T G C A T A C G T C G T A A C G T C G A T A C G T A C G T
A T G C A C G T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C T A C G A T G C A T

FOXL1/MA0033.2/Jaspar

Match Rank:7
Score:0.84
Offset:2
Orientation:reverse strand
Alignment:CTTGTTTATT
--TGTTTAC-
 A T G C C G A T A G C T C T A G C A G T G C A T A C G T C G T A A C G T C G A T
A C G T A C G T C A G T C T A G A C G T C A G T A C G T C T G A G A T C A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:8
Score:0.84
Offset:-4
Orientation:reverse strand
Alignment:----CTTGTTTATT--
NNNNTTTGTTTACNNT
 A C G T A C G T A C G T A C G T A T G C C G A T A G C T C T A G C A G T G C A T A C G T C G T A A C G T C G A T A C G T A C G T
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:9
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:CTTGTTTATT---
-NTGTTTAYATWW
 A T G C C G A T A G C T C T A G C A G T G C A T A C G T C G T A A C G T C G A T A C G T A C G T A C G T
A C G T C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A

Foxj3/MA0851.1/Jaspar

Match Rank:10
Score:0.83
Offset:-3
Orientation:reverse strand
Alignment:---CTTGTTTATT----
NNNTTTGTTTACNTTNN
 A C G T A C G T A C G T A T G C C G A T A G C T C T A G C A G T G C A T A C G T C G T A A C G T C G A T A C G T A C G T A C G T A C G T
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T