Information for 5-NHWTDAATTWWBAAAA (Motif 6)

T A C G G T C A C G T A C G A T C A T G G C T A C G T A C G A T G A C T G C T A C G A T A C G T C G T A C G T A T G C A G T C A
Reverse Opposite:
C A G T A C G T G C A T G C A T T C G A G C T A C G A T C T G A G C T A G C A T C G A T G T A C G C T A G C A T C A G T A T G C
p-value:1e-9
log p-value:-2.104e+01
Information Content per bp:1.472
Number of Target Sequences with motif89.0
Percentage of Target Sequences with motif9.99%
Number of Background Sequences with motif2116.3
Percentage of Background Sequences with motif4.98%
Average Position of motif in Targets48.4 +/- 26.5bp
Average Position of motif in Background50.8 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0078.1_Hoxd13/Jaspar

Match Rank:1
Score:0.63
Offset:4
Orientation:forward strand
Alignment:NHWTDAATTWWBAAAA----
----CTACCAATAAAATTCT
 T A C G G T C A C G T A C G A T C A T G G C T A C G T A C G A T G A C T G C T A C G A T A C G T C G T A C G T A T G C A G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

PB0148.1_Mtf1_2/Jaspar

Match Rank:2
Score:0.63
Offset:5
Orientation:forward strand
Alignment:NHWTDAATTWWBAAAA---
-----AAATAAGAAAAAAC
 T A C G G T C A C G T A C G A T C A T G G C T A C G T A C G A T G A C T G C T A C G A T A C G T C G T A C G T A T G C A G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

PH0075.1_Hoxd10/Jaspar

Match Rank:3
Score:0.62
Offset:4
Orientation:forward strand
Alignment:NHWTDAATTWWBAAAA-----
----AATGCAATAAAATTTAT
 T A C G G T C A C G T A C G A T C A T G G C T A C G T A C G A T G A C T G C T A C G A T A C G T C G T A C G T A T G C A G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:4
Score:0.60
Offset:6
Orientation:forward strand
Alignment:NHWTDAATTWWBAAAA
------NCYAATAAAA
 T A C G G T C A C G T A C G A T C A T G G C T A C G T A C G A T G A C T G C T A C G A T A C G T C G T A C G T A T G C A G T C A
A C G T A C G T A C G T A C G T A C G T A C G T C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A

PH0064.1_Hoxb9/Jaspar

Match Rank:5
Score:0.60
Offset:4
Orientation:forward strand
Alignment:NHWTDAATTWWBAAAA----
----AGAGCCATAAAATTCG
 T A C G G T C A C G T A C G A T C A T G G C T A C G T A C G A T G A C T G C T A C G A T A C G T C G T A C G T A T G C A G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G T C A G T C G A A T C G G A T C G T A C C T G A G A C T C G T A C G T A C G T A C G T A G C A T G A C T G T A C C T A G

PH0018.1_Dbx1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:NHWTDAATTWWBAAAA-
TAATTAATTAATAATTA
 T A C G G T C A C G T A C G A T C A T G G C T A C G T A C G A T G A C T G C T A C G A T A C G T C G T A C G T A T G C A G T C A A C G T
G A C T G C T A C T G A G C A T G C A T G C T A C G T A G C A T G C A T C G T A G C T A G C A T C G T A T C G A C G A T C G A T C T G A

HOXA10/MA0899.1/Jaspar

Match Rank:7
Score:0.60
Offset:6
Orientation:forward strand
Alignment:NHWTDAATTWWBAAAA-
------GGTAATAAAAA
 T A C G G T C A C G T A C G A T C A T G G C T A C G T A C G A T G A C T G C T A C G A T A C G T C G T A C G T A T G C A G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G G A C T T G C A T C G A G C A T C G T A C G T A G T C A G T C A G T C A

PB0129.1_Glis2_2/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:NHWTDAATTWWBAAAA-
---AATATTAATAAAGA
 T A C G G T C A C G T A C G A T C A T G G C T A C G T A C G A T G A C T G C T A C G A T A C G T C G T A C G T A T G C A G T C A A C G T
A C G T A C G T A C G T G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A

HOXD13/MA0909.1/Jaspar

Match Rank:9
Score:0.58
Offset:7
Orientation:forward strand
Alignment:NHWTDAATTWWBAAAA-
-------CCAATAAAAA
 T A C G G T C A C G T A C G A T C A T G G C T A C G T A C G A T G A C T G C T A C G A T A C G T C G T A C G T A T G C A G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:10
Score:0.58
Offset:7
Orientation:forward strand
Alignment:NHWTDAATTWWBAAAA-
-------GTCATAAAAN
 T A C G G T C A C G T A C G A T C A T G G C T A C G T A C G A T G A C T G C T A C G A T A C G T C G T A C G T A T G C A G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T