Information for 3-WGAAACATGAGAA (Motif 2)

C G T A A C T G C G T A C G T A C G T A A T G C T C G A C G A T A C T G G T C A T A C G C T G A C G T A
Reverse Opposite:
C G A T A G C T A G T C A C G T A G T C C G T A A G C T A T C G C G A T A C G T C G A T G T A C C G A T
p-value:1e-13
log p-value:-3.162e+01
Information Content per bp:1.773
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets42.9 +/- 24.3bp
Average Position of motif in Background43.4 +/- 15.3bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:1
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:WGAAACATGAGAA
-GWAAYHTGABMC
 C G T A A C T G C G T A C G T A C G T A A T G C T C G A C G A T A C T G G T C A T A C G C T G A C G T A
A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:WGAAACATGAGAA
-GWAAYHTGAKMC
 C G T A A C T G C G T A C G T A C G T A A T G C T C G A C G A T A C T G G T C A T A C G C T G A C G T A
A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

Hes2/MA0616.1/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---WGAAACATGAGAA
TAACGACACGTGC---
 A C G T A C G T A C G T C G T A A C T G C G T A C G T A C G T A A T G C T C G A C G A T A C T G G T C A T A C G C T G A C G T A
A C G T C G T A C G T A T A G C A T C G C T G A G T A C C T G A G T A C C T A G A C G T C T A G G T A C A C G T A C G T A C G T

FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:WGAAACATGAGAA
GTAAACAWBN---
 C G T A A C T G C G T A C G T A C G T A A T G C T C G A C G A T A C T G G T C A T A C G C T G A C G T A
C T A G C G A T G T C A G T C A T G C A G A T C G C T A G C T A A C T G T C G A A C G T A C G T A C G T

PH0086.1_Irx5/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-WGAAACATGAGAA---
AATATACATGTAAAATT
 A C G T C G T A A C T G C G T A C G T A C G T A A T G C T C G A C G A T A C T G G T C A T A C G C T G A C G T A A C G T A C G T A C G T
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-WGAAACATGAGAA
GCAAAACATTACTA
 A C G T C G T A A C T G C G T A C G T A C G T A A T G C T C G A C G A T A C T G G T C A T A C G C T G A C G T A
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--WGAAACATGAGAA
ATGTAAACADGS---
 A C G T A C G T C G T A A C T G C G T A C G T A C G T A A T G C T C G A C G A T A C T G G T C A T A C G C T G A C G T A
C G T A C A G T T C A G C G A T G T C A G T C A C G T A A G T C C G T A C G A T A T C G A T G C A C G T A C G T A C G T

PH0085.1_Irx4/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-WGAAACATGAGAA---
AATATACATGTAAAACA
 A C G T C G T A A C T G C G T A C G T A C G T A A T G C T C G A C G A T A C T G G T C A T A C G C T G A C G T A A C G T A C G T A C G T
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A

Foxo1/MA0480.1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-WGAAACATGAGAA
TGTAAACAGGA---
 A C G T C G T A A C T G C G T A C G T A C G T A A T G C T C G A C G A T A C T G G T C A T A C G C T G A C G T A
C G A T C T A G C G A T G T C A C G T A C G T A A G T C C G T A T C A G T A C G G T C A A C G T A C G T A C G T

FOXG1/MA0613.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:WGAAACATGAGAA
GTAAACAA-----
 C G T A A C T G C G T A C G T A C G T A A T G C T C G A C G A T A C T G G T C A T A C G C T G A C G T A
C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A A C G T A C G T A C G T A C G T A C G T