Information for 11-CTCCHCTGCTGYY (Motif 12)

A G T C A G C T A G T C A G T C G A C T A G T C A C G T A T C G A T G C G A C T A T C G A G T C G A C T
Reverse Opposite:
C T G A C T A G A T G C C T G A A T C G A T G C C G T A A C T G C T G A A C T G A C T G C T G A A C T G
p-value:1e-5
log p-value:-1.154e+01
Information Content per bp:1.764
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.02%
Number of Background Sequences with motif252.0
Percentage of Background Sequences with motif0.59%
Average Position of motif in Targets53.1 +/- 28.4bp
Average Position of motif in Background47.3 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTCCHCTGCTGYY
-CCCCCTGCTGTG
 A G T C A G C T A G T C A G T C G A C T A G T C A C G T A T C G A T G C G A C T A T C G A G T C G A C T
A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

MZF1/MA0056.1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTCCHCTGCTGYY
-TCCCCA------
 A G T C A G C T A G T C A G T C G A C T A G T C A C G T A T C G A T G C G A C T A T C G A G T C G A C T
A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTCCHCTGCTGYY
ATCCAC-------
 A G T C A G C T A G T C A G T C G A C T A G T C A C G T A T C G A T G C G A C T A T C G A G T C G A C T
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTCCHCTGCTGYY
TTCCCCCTAC----
 A C G T A G T C A G C T A G T C A G T C G A C T A G T C A C G T A T C G A T G C G A C T A T C G A G T C G A C T
A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C A C G T A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTCCHCTGCTGYY--
AATCGCACTGCATTCCG
 A C G T A C G T A G T C A G C T A G T C A G T C G A C T A G T C A C G T A T C G A T G C G A C T A T C G A G T C G A C T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

ZEB1/MA0103.2/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTCCHCTGCTGYY
CCTCACCTG-----
 A C G T A G T C A G C T A G T C A G T C G A C T A G T C A C G T A T C G A T G C G A C T A T C G A G T C G A C T
T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:7
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CTCCHCTGCTGYY
ATCCCCGCCCCTAAAA--
 A C G T A C G T A C G T A C G T A C G T A G T C A G C T A G T C A G T C G A C T A G T C A C G T A T C G A T G C G A C T A T C G A G T C G A C T
G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A A C G T A C G T

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTCCHCTGCTGYY-
--CCCCTCCCCCAC
 A G T C A G C T A G T C A G T C G A C T A G T C A C G T A T C G A T G C G A C T A T C G A G T C G A C T A C G T
A C G T A C G T T A G C G T A C A G T C G T A C C G A T A G T C A G T C A G T C A G T C A G T C C G T A G A T C

SP1/MA0079.3/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CTCCHCTGCTGYY
GCCCCGCCCCC---
 A C G T A G T C A G C T A G T C A G T C G A C T A G T C A C G T A T C G A T G C G A C T A T C G A G T C G A C T
A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTCCHCTGCTGYY-
GGCCYCCTGCTGDGH
 A C G T A G T C A G C T A G T C A G T C G A C T A G T C A C G T A T C G A T G C G A C T A T C G A G T C G A C T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C