Information for 1-NGNRGCAGSTGSNNBN (Motif 1)

T C A G T A C G T C A G C T A G T C A G A G T C C G T A A C T G A T C G A C G T A C T G A T G C T C A G A T C G A T C G A C G T
Reverse Opposite:
T C G A T A G C T A G C A G T C T A C G A G T C C G T A A T G C A G T C A C G T A C T G A G T C G A T C A G T C A T G C A G T C
p-value:1e-439
log p-value:-1.013e+03
Information Content per bp:1.580
Number of Target Sequences with motif766.0
Percentage of Target Sequences with motif85.97%
Number of Background Sequences with motif7325.1
Percentage of Background Sequences with motif17.23%
Average Position of motif in Targets51.3 +/- 20.0bp
Average Position of motif in Background50.6 +/- 39.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.46
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myod1/MA0499.1/Jaspar

Match Rank:1
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:NGNRGCAGSTGSNNBN
NGNGACAGCTGCN---
 T C A G T A C G T C A G C T A G T C A G A G T C C G T A A C T G A T C G A C G T A C T G A T G C T C A G A T C G A T C G A C G T
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:2
Score:0.94
Offset:3
Orientation:forward strand
Alignment:NGNRGCAGSTGSNNBN
---GACAGCTGCAG--
 T C A G T A C G T C A G C T A G T C A G A G T C C G T A A C T G A T C G A C G T A C T G A T G C T C A G A T C G A T C G A C G T
A C G T A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:3
Score:0.93
Offset:3
Orientation:forward strand
Alignment:NGNRGCAGSTGSNNBN
---AACAGCTGCAG--
 T C A G T A C G T C A G C T A G T C A G A G T C C G T A A C T G A T C G A C G T A C T G A T G C T C A G A T C G A T C G A C G T
A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:4
Score:0.93
Offset:4
Orientation:reverse strand
Alignment:NGNRGCAGSTGSNNBN
----GCAGCTGTNN--
 T C A G T A C G T C A G C T A G T C A G A G T C C G T A A C T G A T C G A C G T A C T G A T G C T C A G A T C G A T C G A C G T
A C G T A C G T A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:5
Score:0.93
Offset:1
Orientation:forward strand
Alignment:NGNRGCAGSTGSNNBN
-NNVVCAGCTGBN---
 T C A G T A C G T C A G C T A G T C A G A G T C C G T A A C T G A T C G A C G T A C T G A T G C T C A G A T C G A T C G A C G T
A C G T C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:6
Score:0.92
Offset:3
Orientation:reverse strand
Alignment:NGNRGCAGSTGSNNBN
---NNCAGGTGCG---
 T C A G T A C G T C A G C T A G T C A G A G T C C G T A A C T G A T C G A C G T A C T G A T G C T C A G A T C G A T C G A C G T
A C G T A C G T A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:7
Score:0.92
Offset:3
Orientation:reverse strand
Alignment:NGNRGCAGSTGSNNBN
---NNCAGGTGTN---
 T C A G T A C G T C A G C T A G T C A G A G T C C G T A A C T G A T C G A C G T A C T G A T G C T C A G A T C G A T C G A C G T
A C G T A C G T A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T A C G T A C G T

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.92
Offset:2
Orientation:reverse strand
Alignment:NGNRGCAGSTGSNNBN
--NAACAGCTGT----
 T C A G T A C G T C A G C T A G T C A G A G T C C G T A A C T G A T C G A C G T A C T G A T G C T C A G A T C G A T C G A C G T
A C G T A C G T T C A G T G C A T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.92
Offset:2
Orientation:reverse strand
Alignment:NGNRGCAGSTGSNNBN
--CAGCAGCTGN----
 T C A G T A C G T C A G C T A G T C A G A G T C C G T A A C T G A T C G A C G T A C T G A T G C T C A G A T C G A T C G A C G T
A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:10
Score:0.92
Offset:3
Orientation:reverse strand
Alignment:NGNRGCAGSTGSNNBN
---GACAGGTGTN---
 T C A G T A C G T C A G C T A G T C A G A G T C C G T A A C T G A T C G A C G T A C T G A T G C T C A G A T C G A T C G A C G T
A C G T A C G T A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T A C G T A C G T