Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer | 1e-428 | -9.878e+02 | 0.0000 | 756.0 | 83.35% | 7002.9 | 16.42% | motif file (matrix) |
svg |
2 |
| HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer | 1e-410 | -9.446e+02 | 0.0000 | 788.0 | 86.88% | 8538.2 | 20.02% | motif file (matrix) |
svg |
3 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-373 | -8.608e+02 | 0.0000 | 824.0 | 90.85% | 11082.9 | 25.99% | motif file (matrix) |
svg |
4 |
| Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer | 1e-357 | -8.240e+02 | 0.0000 | 701.0 | 77.29% | 6969.5 | 16.34% | motif file (matrix) |
svg |
5 |
| E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-262 | -6.034e+02 | 0.0000 | 581.0 | 64.06% | 5961.2 | 13.98% | motif file (matrix) |
svg |
6 |
| Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer | 1e-242 | -5.583e+02 | 0.0000 | 405.0 | 44.65% | 2506.5 | 5.88% | motif file (matrix) |
svg |
7 |
| Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer | 1e-240 | -5.545e+02 | 0.0000 | 513.0 | 56.56% | 4756.8 | 11.16% | motif file (matrix) |
svg |
8 |
| MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer | 1e-216 | -4.983e+02 | 0.0000 | 488.0 | 53.80% | 4746.4 | 11.13% | motif file (matrix) |
svg |
9 |
| ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer | 1e-196 | -4.532e+02 | 0.0000 | 535.0 | 58.99% | 6559.7 | 15.38% | motif file (matrix) |
svg |
10 |
| Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer | 1e-174 | -4.022e+02 | 0.0000 | 412.0 | 45.42% | 4002.8 | 9.39% | motif file (matrix) |
svg |
11 |
| Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer | 1e-163 | -3.771e+02 | 0.0000 | 356.0 | 39.25% | 3038.4 | 7.13% | motif file (matrix) |
svg |
12 |
| Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer | 1e-157 | -3.633e+02 | 0.0000 | 437.0 | 48.18% | 5100.8 | 11.96% | motif file (matrix) |
svg |
13 |
| Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer | 1e-152 | -3.512e+02 | 0.0000 | 394.0 | 43.44% | 4173.5 | 9.79% | motif file (matrix) |
svg |
14 |
| MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer | 1e-152 | -3.511e+02 | 0.0000 | 372.0 | 41.01% | 3658.6 | 8.58% | motif file (matrix) |
svg |
15 |
| NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer | 1e-117 | -2.705e+02 | 0.0000 | 379.0 | 41.79% | 4915.2 | 11.53% | motif file (matrix) |
svg |
16 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-105 | -2.433e+02 | 0.0000 | 276.0 | 30.43% | 2767.6 | 6.49% | motif file (matrix) |
svg |
17 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-97 | -2.255e+02 | 0.0000 | 692.0 | 76.30% | 17858.8 | 41.88% | motif file (matrix) |
svg |
18 |
| Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer | 1e-97 | -2.237e+02 | 0.0000 | 373.0 | 41.12% | 5558.7 | 13.04% | motif file (matrix) |
svg |
19 |
| Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer | 1e-75 | -1.738e+02 | 0.0000 | 454.0 | 50.06% | 9403.5 | 22.05% | motif file (matrix) |
svg |
20 |
| ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer | 1e-34 | -7.844e+01 | 0.0000 | 124.0 | 13.67% | 1595.4 | 3.74% | motif file (matrix) |
svg |
21 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-29 | -6.838e+01 | 0.0000 | 105.0 | 11.58% | 1313.7 | 3.08% | motif file (matrix) |
svg |
22 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-26 | -6.119e+01 | 0.0000 | 88.0 | 9.70% | 1037.2 | 2.43% | motif file (matrix) |
svg |
23 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-23 | -5.309e+01 | 0.0000 | 87.0 | 9.59% | 1147.8 | 2.69% | motif file (matrix) |
svg |
24 |
| Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer | 1e-20 | -4.819e+01 | 0.0000 | 51.0 | 5.62% | 443.9 | 1.04% | motif file (matrix) |
svg |
25 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-20 | -4.607e+01 | 0.0000 | 44.0 | 4.85% | 340.6 | 0.80% | motif file (matrix) |
svg |
26 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-19 | -4.534e+01 | 0.0000 | 78.0 | 8.60% | 1070.3 | 2.51% | motif file (matrix) |
svg |
27 |
| NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-19 | -4.384e+01 | 0.0000 | 236.0 | 26.02% | 6178.1 | 14.49% | motif file (matrix) |
svg |
28 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-18 | -4.295e+01 | 0.0000 | 105.0 | 11.58% | 1844.1 | 4.32% | motif file (matrix) |
svg |
29 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-17 | -4.090e+01 | 0.0000 | 61.0 | 6.73% | 745.8 | 1.75% | motif file (matrix) |
svg |
30 |
| RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer | 1e-15 | -3.631e+01 | 0.0000 | 60.0 | 6.62% | 800.5 | 1.88% | motif file (matrix) |
svg |
31 |
| PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer | 1e-15 | -3.477e+01 | 0.0000 | 85.0 | 9.37% | 1493.7 | 3.50% | motif file (matrix) |
svg |
32 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-12 | -2.787e+01 | 0.0000 | 68.0 | 7.50% | 1197.6 | 2.81% | motif file (matrix) |
svg |
33 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-11 | -2.763e+01 | 0.0000 | 56.0 | 6.17% | 875.1 | 2.05% | motif file (matrix) |
svg |
34 |
| NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer | 1e-11 | -2.674e+01 | 0.0000 | 118.0 | 13.01% | 2808.9 | 6.59% | motif file (matrix) |
svg |
35 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-10 | -2.459e+01 | 0.0000 | 68.0 | 7.50% | 1291.6 | 3.03% | motif file (matrix) |
svg |
36 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-10 | -2.440e+01 | 0.0000 | 51.0 | 5.62% | 817.8 | 1.92% | motif file (matrix) |
svg |
37 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-9 | -2.212e+01 | 0.0000 | 104.0 | 11.47% | 2542.3 | 5.96% | motif file (matrix) |
svg |
38 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-9 | -2.132e+01 | 0.0000 | 60.0 | 6.62% | 1155.8 | 2.71% | motif file (matrix) |
svg |
39 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-9 | -2.111e+01 | 0.0000 | 234.0 | 25.80% | 7539.9 | 17.68% | motif file (matrix) |
svg |
40 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-8 | -1.951e+01 | 0.0000 | 133.0 | 14.66% | 3718.8 | 8.72% | motif file (matrix) |
svg |
41 |
| Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer | 1e-8 | -1.942e+01 | 0.0000 | 19.0 | 2.09% | 160.5 | 0.38% | motif file (matrix) |
svg |
42 |
| Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer | 1e-7 | -1.779e+01 | 0.0000 | 54.0 | 5.95% | 1089.6 | 2.56% | motif file (matrix) |
svg |
43 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-7 | -1.769e+01 | 0.0000 | 110.0 | 12.13% | 2985.3 | 7.00% | motif file (matrix) |
svg |
44 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-7 | -1.734e+01 | 0.0000 | 43.0 | 4.74% | 778.4 | 1.83% | motif file (matrix) |
svg |
45 |
| Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer | 1e-7 | -1.716e+01 | 0.0000 | 132.0 | 14.55% | 3832.5 | 8.99% | motif file (matrix) |
svg |
46 |
| Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer | 1e-7 | -1.688e+01 | 0.0000 | 138.0 | 15.21% | 4079.8 | 9.57% | motif file (matrix) |
svg |
47 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-7 | -1.676e+01 | 0.0000 | 96.0 | 10.58% | 2535.1 | 5.95% | motif file (matrix) |
svg |
48 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-6 | -1.605e+01 | 0.0000 | 96.0 | 10.58% | 2575.8 | 6.04% | motif file (matrix) |
svg |
49 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-6 | -1.544e+01 | 0.0000 | 80.0 | 8.82% | 2042.0 | 4.79% | motif file (matrix) |
svg |
50 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-6 | -1.487e+01 | 0.0000 | 71.0 | 7.83% | 1760.0 | 4.13% | motif file (matrix) |
svg |
51 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-6 | -1.449e+01 | 0.0000 | 58.0 | 6.39% | 1341.4 | 3.15% | motif file (matrix) |
svg |
52 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-6 | -1.440e+01 | 0.0000 | 97.0 | 10.69% | 2710.4 | 6.36% | motif file (matrix) |
svg |
53 |
| ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer | 1e-6 | -1.430e+01 | 0.0000 | 20.0 | 2.21% | 246.2 | 0.58% | motif file (matrix) |
svg |
54 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-5 | -1.274e+01 | 0.0000 | 43.0 | 4.74% | 928.9 | 2.18% | motif file (matrix) |
svg |
55 |
| Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer | 1e-5 | -1.246e+01 | 0.0000 | 178.0 | 19.63% | 6038.5 | 14.16% | motif file (matrix) |
svg |
56 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-5 | -1.180e+01 | 0.0000 | 59.0 | 6.50% | 1501.3 | 3.52% | motif file (matrix) |
svg |
57 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-4 | -1.141e+01 | 0.0001 | 26.0 | 2.87% | 461.2 | 1.08% | motif file (matrix) |
svg |
58 |
| Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer | 1e-4 | -1.127e+01 | 0.0001 | 98.0 | 10.80% | 2962.8 | 6.95% | motif file (matrix) |
svg |
59 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-4 | -1.087e+01 | 0.0001 | 220.0 | 24.26% | 7972.1 | 18.70% | motif file (matrix) |
svg |
60 |
| c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-4 | -1.067e+01 | 0.0001 | 23.0 | 2.54% | 397.7 | 0.93% | motif file (matrix) |
svg |
61 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-4 | -1.037e+01 | 0.0002 | 20.0 | 2.21% | 323.8 | 0.76% | motif file (matrix) |
svg |
62 |
| Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer | 1e-4 | -1.029e+01 | 0.0002 | 47.0 | 5.18% | 1165.1 | 2.73% | motif file (matrix) |
svg |
63 |
| Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer | 1e-4 | -9.225e+00 | 0.0006 | 17.0 | 1.87% | 270.7 | 0.63% | motif file (matrix) |
svg |
64 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-3 | -8.770e+00 | 0.0009 | 77.0 | 8.49% | 2353.0 | 5.52% | motif file (matrix) |
svg |
65 |
| Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer | 1e-3 | -8.582e+00 | 0.0010 | 23.0 | 2.54% | 458.4 | 1.07% | motif file (matrix) |
svg |
66 |
| Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer | 1e-3 | -7.585e+00 | 0.0028 | 41.0 | 4.52% | 1099.5 | 2.58% | motif file (matrix) |
svg |
67 |
| Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer | 1e-3 | -7.066e+00 | 0.0046 | 118.0 | 13.01% | 4154.9 | 9.74% | motif file (matrix) |
svg |
68 |
| Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer | 1e-2 | -6.827e+00 | 0.0058 | 126.0 | 13.89% | 4515.9 | 10.59% | motif file (matrix) |
svg |
69 |
| Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer | 1e-2 | -6.711e+00 | 0.0064 | 59.0 | 6.50% | 1826.4 | 4.28% | motif file (matrix) |
svg |
70 |
| Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer | 1e-2 | -6.484e+00 | 0.0079 | 27.0 | 2.98% | 670.4 | 1.57% | motif file (matrix) |
svg |
71 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-2 | -6.422e+00 | 0.0083 | 24.0 | 2.65% | 572.1 | 1.34% | motif file (matrix) |
svg |
72 |
| Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer | 1e-2 | -6.325e+00 | 0.0091 | 170.0 | 18.74% | 6452.0 | 15.13% | motif file (matrix) |
svg |
73 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-2 | -6.091e+00 | 0.0113 | 32.0 | 3.53% | 865.2 | 2.03% | motif file (matrix) |
svg |
74 |
| Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer | 1e-2 | -5.916e+00 | 0.0133 | 22.0 | 2.43% | 528.6 | 1.24% | motif file (matrix) |
svg |
75 |
| BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer | 1e-2 | -5.883e+00 | 0.0135 | 82.0 | 9.04% | 2814.6 | 6.60% | motif file (matrix) |
svg |
76 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-2 | -5.832e+00 | 0.0140 | 27.0 | 2.98% | 703.3 | 1.65% | motif file (matrix) |
svg |
77 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-2 | -5.700e+00 | 0.0158 | 41.0 | 4.52% | 1220.1 | 2.86% | motif file (matrix) |
svg |
78 |
| EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer | 1e-2 | -5.680e+00 | 0.0159 | 20.0 | 2.21% | 472.7 | 1.11% | motif file (matrix) |
svg |
79 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-2 | -5.587e+00 | 0.0173 | 30.0 | 3.31% | 823.5 | 1.93% | motif file (matrix) |
svg |
80 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-2 | -5.573e+00 | 0.0173 | 25.0 | 2.76% | 647.4 | 1.52% | motif file (matrix) |
svg |
81 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-2 | -5.530e+00 | 0.0178 | 84.0 | 9.26% | 2935.2 | 6.88% | motif file (matrix) |
svg |
82 |
| Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.440e+00 | 0.0193 | 98.0 | 10.80% | 3524.1 | 8.26% | motif file (matrix) |
svg |
83 |
| Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer | 1e-2 | -5.331e+00 | 0.0212 | 113.0 | 12.46% | 4167.6 | 9.77% | motif file (matrix) |
svg |
84 |
| T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer | 1e-2 | -5.247e+00 | 0.0228 | 2.0 | 0.22% | 5.6 | 0.01% | motif file (matrix) |
svg |
85 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-2 | -5.039e+00 | 0.0277 | 62.0 | 6.84% | 2097.0 | 4.92% | motif file (matrix) |
svg |
86 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.991e+00 | 0.0288 | 32.0 | 3.53% | 935.0 | 2.19% | motif file (matrix) |
svg |
87 |
| KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer | 1e-2 | -4.967e+00 | 0.0291 | 99.0 | 10.92% | 3628.5 | 8.51% | motif file (matrix) |
svg |
88 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-2 | -4.936e+00 | 0.0297 | 26.0 | 2.87% | 718.8 | 1.69% | motif file (matrix) |
svg |
89 |
| AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer | 1e-2 | -4.657e+00 | 0.0389 | 88.0 | 9.70% | 3209.2 | 7.53% | motif file (matrix) |
svg |