Information for 14-AGCAGYMGGA (Motif 14)

C T G A A C T G A G T C C G T A A C T G A G C T G T A C A C T G A C T G C T G A
Reverse Opposite:
A G C T A G T C A G T C A C T G C T G A A G T C A C G T A C T G A G T C A G C T
p-value:1e-2
log p-value:-6.592e+00
Information Content per bp:1.880
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif22.6
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets68.2 +/- 9.9bp
Average Position of motif in Background54.0 +/- 36.3bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0205.1_Zic1_2/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AGCAGYMGGA--
CCACACAGCAGGAGA
 A C G T A C G T A C G T C T G A A C T G A G T C C G T A A C T G A G C T G T A C A C T G A C T G C T G A A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AGCAGYMGGA--
GAGCACAGCAGGACA
 A C G T A C G T A C G T C T G A A C T G A G T C C G T A A C T G A G C T G T A C A C T G A C T G C T G A A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AGCAGYMGGA--
CCACACAGCAGGAGA
 A C G T A C G T A C G T C T G A A C T G A G T C C G T A A C T G A G C T G T A C A C T G A C T G C T G A A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AGCAGYMGGA
DCTCAGCAGG-
 A C G T C T G A A C T G A G T C C G T A A C T G A G C T G T A C A C T G A C T G C T G A
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AGCAGYMGGA----
DCHCAGCAGGRGGCC
 A C G T C T G A A C T G A G T C C G T A A C T G A G C T G T A C A C T G A C T G C T G A A C G T A C G T A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGCAGYMGGA--
CACAGCAGGGGG
 C T G A A C T G A G T C C G T A A C T G A G C T G T A C A C T G A C T G C T G A A C G T A C G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGCAGYMGGA
ANCAGCTG--
 C T G A A C T G A G T C C G T A A C T G A G C T G T A C A C T G A C T G C T G A
C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGCAGYMGGA
NAACAGCTGG-
 A C G T C T G A A C T G A G T C C G T A A C T G A G C T G T A C A C T G A C T G C T G A
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AGCAGYMGGA
CAGCAGCTGN-
 A C G T C T G A A C T G A G T C C G T A A C T G A G C T G T A C A C T G A C T G C T G A
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T

Myog/MA0500.1/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGCAGYMGGA-
GACAGCTGCAG
 C T G A A C T G A G T C C G T A A C T G A G C T G T A C A C T G A C T G C T G A A C G T
T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G