Information for 3-CAAATCCTAGTCCAGC (Motif 2)

A G T C C G T A C G T A C G T A A C G T A G T C G T A C A G C T G T C A A C T G A G C T G T A C G T A C C G T A A C T G A G T C
Reverse Opposite:
C T A G A G T C C G A T A C T G A C T G C T G A G T A C A C G T C T G A A C T G A C T G G T C A C G A T A C G T C G A T A C T G
p-value:1e-12
log p-value:-2.766e+01
Information Content per bp:1.783
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif0.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.5 +/- 24.8bp
Average Position of motif in Background68.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:1
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CAAATCCTAGTCCAGC---
----TCCCAGMCRAGCCCC
 A G T C C G T A C G T A C G T A A C G T A G T C G T A C A G C T G T C A A C T G A G C T G T A C G T A C C G T A A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

PB0181.1_Spdef_2/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CAAATCCTAGTCCAGC
GATAACATCCTAGTAG---
 A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C G T A G T C G T A C A G C T G T C A A C T G A G C T G T A C G T A C C G T A A C T G A G T C
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G A C G T A C G T A C G T

Crx/MA0467.1/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CAAATCCTAGTCCAGC
CTAATCCTCTT-----
 A G T C C G T A C G T A C G T A A C G T A G T C G T A C A G C T G T C A A C T G A G C T G T A C G T A C C G T A A C T G A G T C
G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T A C G T A C G T A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CAAATCCTAGTCCAGC
CAAATCACTG------
 A G T C C G T A C G T A C G T A A C G T A G T C G T A C A G C T G T C A A C T G A G C T G T A C G T A C C G T A A C T G A G T C
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T A C G T A C G T A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:5
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CAAATCCTAGTCCAGC
GCTAATCC---------
 A C G T A G T C C G T A C G T A C G T A A C G T A G T C G T A C A G C T G T C A A C T G A G C T G T A C G T A C C G T A A C T G A G T C
A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:6
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CAAATCCTAGTCCAGC
-AAATCACAGCA----
 A G T C C G T A C G T A C G T A A C G T A G T C G T A C A G C T G T C A A C T G A G C T G T A C G T A C C G T A A C T G A G T C
A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T A C G T A C G T A C G T

GFY(?)/Promoter/Homer

Match Rank:7
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----CAAATCCTAGTCCAGC
ACTACAATTCCC--------
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C G T A G T C G T A C A G C T G T C A A C T G A G C T G T A C G T A C C G T A A C T G A G T C
T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:8
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CAAATCCTAGTCCAGC
NYTAATCCYB-------
 A C G T A G T C C G T A C G T A C G T A A C G T A G T C G T A C A G C T G T C A A C T G A G C T G T A C G T A C C G T A A C T G A G T C
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CAAATCCTAGTCCAGC
-TAATCCCN-------
 A G T C C G T A C G T A C G T A A C G T A G T C G T A C A G C T G T C A A C T G A G C T G T A C G T A C C G T A A C T G A G T C
A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CAAATCCTAGTCCAGC
CTTAATCCC--------
 A C G T A G T C C G T A C G T A C G T A A C G T A G T C G T A C A G C T G T C A A C T G A G C T G T A C G T A C C G T A A C T G A G T C
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T