Information for 17-TCCKGCTGGGGSC (Motif 14)

G C A T T G A C G T A C C A T G A T C G A T G C A G C T C T A G C T A G C T A G A C T G A T G C A G T C
Reverse Opposite:
C T A G T A C G A G T C A G T C A G T C A G T C C T G A A T C G A T G C G T A C A C T G A C T G C G T A
p-value:1e-5
log p-value:-1.299e+01
Information Content per bp:1.758
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.58%
Number of Background Sequences with motif55.5
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets43.3 +/- 28.0bp
Average Position of motif in Background55.5 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TCCKGCTGGGGSC
CCCCCTGCTGTG---
 A C G T A C G T G C A T T G A C G T A C C A T G A T C G A T G C A G C T C T A G C T A G C T A G A C T G A T G C A G T C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----TCCKGCTGGGGSC
GGCCYCCTGCTGDGH--
 A C G T A C G T A C G T A C G T G C A T T G A C G T A C C A T G A T C G A T G C A G C T C T A G C T A G C T A G A C T G A T G C A G T C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TCCKGCTGGGGSC
TCNCCTGCTGNGNNN
 A C G T A C G T G C A T T G A C G T A C C A T G A T C G A T G C A G C T C T A G C T A G C T A G A C T G A T G C A G T C
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TCCKGCTGGGGSC
TNTCCTGCTGTGNNG
 A C G T A C G T G C A T T G A C G T A C C A T G A T C G A T G C A G C T C T A G C T A G C T A G A C T G A T G C A G T C
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TCCKGCTGGGGSC
-CCTGCTGAGH--
 G C A T T G A C G T A C C A T G A T C G A T G C A G C T C T A G C T A G C T A G A C T G A T G C A G T C
A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TCCKGCTGGGGSC
NNTCCTGCTGTGNNN
 A C G T A C G T G C A T T G A C G T A C C A T G A T C G A T G C A G C T C T A G C T A G C T A G A C T G A T G C A G T C
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TCCKGCTGGGGSC-------
GCCASCAGGGGGCGCYVNNG
 G C A T T G A C G T A C C A T G A T C G A T G C A G C T C T A G C T A G C T A G A C T G A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

Zfx/MA0146.2/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TCCKGCTGGGGSC--
-GGGGCCGAGGCCTG
 G C A T T G A C G T A C C A T G A T C G A T G C A G C T C T A G C T A G C T A G A C T G A T G C A G T C A C G T A C G T
A C G T A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

TFAP2A/MA0003.3/Jaspar

Match Rank:9
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TCCKGCTGGGGSC-
---NGCCTGAGGCN
 G C A T T G A C G T A C C A T G A T C G A T G C A G C T C T A G C T A G C T A G A C T G A T G C A G T C A C G T
A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TCCKGCTGGGGSC
NAACAGCTGG----
 A C G T G C A T T G A C G T A C C A T G A T C G A T G C A G C T C T A G C T A G C T A G A C T G A T G C A G T C
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T A C G T