Information for 5-AGGCGGGGCC (Motif 5)

C G T A A C T G A T C G A G T C A T C G A T C G T C A G A T C G T A G C A T G C
Reverse Opposite:
A T C G A T C G T A G C A G T C T A G C A T G C C T A G A T G C A G T C G C A T
p-value:1e-13
log p-value:-3.059e+01
Information Content per bp:1.731
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif4.55%
Number of Background Sequences with motif440.8
Percentage of Background Sequences with motif1.01%
Average Position of motif in Targets51.8 +/- 28.1bp
Average Position of motif in Background50.1 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--AGGCGGGGCC
GGGGGCGGGGCC
 A C G T A C G T C G T A A C T G A T C G A G T C A T C G A T C G T C A G A T C G T A G C A T G C
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

PB0180.1_Sp4_2/Jaspar

Match Rank:2
Score:0.81
Offset:-3
Orientation:forward strand
Alignment:---AGGCGGGGCC--
CAAAGGCGTGGCCAG
 A C G T A C G T A C G T C G T A A C T G A T C G A G T C A T C G A T C G T C A G A T C G T A G C A T G C A C G T A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

PB0164.1_Smad3_2/Jaspar

Match Rank:3
Score:0.79
Offset:-5
Orientation:reverse strand
Alignment:-----AGGCGGGGCC--
NAGANTGGCGGGGNGNA
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A T C G A G T C A T C G A T C G T C A G A T C G T A G C A T G C A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

SP2/MA0516.1/Jaspar

Match Rank:4
Score:0.78
Offset:-6
Orientation:reverse strand
Alignment:------AGGCGGGGCC
GGGNGGGGGCGGGGC-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A T C G A G T C A T C G A T C G T C A G A T C G T A G C A T G C
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T

POL003.1_GC-box/Jaspar

Match Rank:5
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---AGGCGGGGCC-
AGGGGGCGGGGCTG
 A C G T A C G T A C G T C G T A A C T G A T C G A G T C A T C G A T C G T C A G A T C G T A G C A T G C A C G T
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

SP1/MA0079.3/Jaspar

Match Rank:6
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--AGGCGGGGCC
GGGGGCGGGGC-
 A C G T A C G T C G T A A C T G A T C G A G T C A T C G A T C G T C A G A T C G T A G C A T G C
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:7
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---AGGCGGGGCC
RGKGGGCGGAGC-
 A C G T A C G T A C G T C G T A A C T G A T C G A G T C A T C G A T C G T C A G A T C G T A G C A T G C
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T

POL006.1_BREu/Jaspar

Match Rank:8
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:AGGCGGGGCC
-GGCGCGCT-
 C G T A A C T G A T C G A G T C A T C G A T C G T C A G A T C G T A G C A T G C
A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-AGGCGGGGCC
DGGGYGKGGC-
 A C G T C G T A A C T G A T C G A G T C A T C G A T C G T C A G A T C G T A G C A T G C
C G T A C T A G A C T G A C T G G A C T C T A G C A G T C T A G C A T G G A T C A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:10
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----AGGCGGGGCC--
NNAGGGGCGGGGTNNA
 A C G T A C G T A C G T A C G T C G T A A C T G A T C G A G T C A T C G A T C G T C A G A T C G T A G C A T G C A C G T A C G T
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A