Information for 1-GCAGCTGCYB (Motif 1)

T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A T C A G T C
Reverse Opposite:
T C A G C T A G T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C
p-value:1e-351
log p-value:-8.105e+02
Information Content per bp:1.720
Number of Target Sequences with motif643.0
Percentage of Target Sequences with motif77.01%
Number of Background Sequences with motif6453.9
Percentage of Background Sequences with motif14.85%
Average Position of motif in Targets49.1 +/- 21.5bp
Average Position of motif in Background50.4 +/- 41.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.37
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:1
Score:0.97
Offset:-2
Orientation:forward strand
Alignment:--GCAGCTGCYB
NNACAGCTGC--
 A C G T A C G T T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A T C A G T C
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.96
Offset:0
Orientation:forward strand
Alignment:GCAGCTGCYB
NCAGCTGCTG
 T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A T C A G T C
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.95
Offset:0
Orientation:forward strand
Alignment:GCAGCTGCYB
ACAGCTGTTN
 T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A T C A G T C
T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A G T C

Myog/MA0500.1/Jaspar

Match Rank:4
Score:0.95
Offset:-2
Orientation:reverse strand
Alignment:--GCAGCTGCYB
NNGCAGCTGTC-
 A C G T A C G T T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A T C A G T C
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:5
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-GCAGCTGCYB-
AGCAGCTGCTNN
 A C G T T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A T C A G T C A C G T
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

Myod1/MA0499.1/Jaspar

Match Rank:6
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-GCAGCTGCYB--
TGCAGCTGTCCCT
 A C G T T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A T C A G T C A C G T A C G T
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

Ascl2/MA0816.1/Jaspar

Match Rank:7
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-GCAGCTGCYB
AGCAGCTGCT-
 A C G T T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A T C A G T C
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:8
Score:0.94
Offset:-2
Orientation:reverse strand
Alignment:--GCAGCTGCYB
NNGCAGCTGTT-
 A C G T A C G T T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A T C A G T C
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:9
Score:0.93
Offset:-4
Orientation:forward strand
Alignment:----GCAGCTGCYB---
CTCAGCAGCTGCTACTG
 A C G T A C G T A C G T A C G T T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A T C A G T C A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:10
Score:0.93
Offset:-1
Orientation:reverse strand
Alignment:-GCAGCTGCYB-
NVCAGCTGBBNN
 A C G T T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A T C A G T C A C G T
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C