Information for 5-GCVCCKCCCC (Motif 6)

T A C G A G T C T G A C T G A C A G T C A C G T A G T C A G T C A G T C G A T C
Reverse Opposite:
C T A G A C T G A C T G A C T G T G C A C T A G A C T G A C T G C T A G A T G C
p-value:1e-11
log p-value:-2.665e+01
Information Content per bp:1.690
Number of Target Sequences with motif117.0
Percentage of Target Sequences with motif13.45%
Number of Background Sequences with motif2946.3
Percentage of Background Sequences with motif6.80%
Average Position of motif in Targets46.0 +/- 28.8bp
Average Position of motif in Background49.7 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

KLF5/MA0599.1/Jaspar

Match Rank:1
Score:0.91
Offset:0
Orientation:forward strand
Alignment:GCVCCKCCCC
GCCCCGCCCC
 T A C G A G T C T G A C T G A C A G T C A C G T A G T C A G T C A G T C G A T C
A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C

SP1/MA0079.3/Jaspar

Match Rank:2
Score:0.90
Offset:0
Orientation:forward strand
Alignment:GCVCCKCCCC-
GCCCCGCCCCC
 T A C G A G T C T G A C T G A C A G T C A C G T A G T C A G T C A G T C G A T C A C G T
A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C

POL003.1_GC-box/Jaspar

Match Rank:3
Score:0.89
Offset:-2
Orientation:reverse strand
Alignment:--GCVCCKCCCC--
NAGCCCCGCCCCCN
 A C G T A C G T T A C G A G T C T G A C T G A C A G T C A C G T A G T C A G T C A G T C G A T C A C G T A C G T
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

Sp1(Zf)/Promoter/Homer

Match Rank:4
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-GCVCCKCCCC-
GGCCCCGCCCCC
 A C G T T A C G A G T C T G A C T G A C A G T C A C G T A G T C A G T C A G T C G A T C A C G T
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:5
Score:0.86
Offset:-2
Orientation:forward strand
Alignment:--GCVCCKCCCC---
NRGCCCCRCCCHBNN
 A C G T A C G T T A C G A G T C T G A C T G A C A G T C A C G T A G T C A G T C A G T C G A T C A C G T A C G T A C G T
G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

Klf4/MA0039.2/Jaspar

Match Rank:6
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:GCVCCKCCCC
GCCCCACCCA
 T A C G A G T C T G A C T G A C A G T C A C G T A G T C A G T C A G T C G A T C
T C A G T G A C G A T C T G A C G T A C C T G A T A G C A G T C A G T C G C T A

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:GCVCCKCCCC--
GCCMCGCCCMCY
 T A C G A G T C T G A C T G A C A G T C A C G T A G T C A G T C A G T C G A T C A C G T A C G T
T A C G A G T C G A T C T G A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C G A T C

PB0110.1_Bcl6b_2/Jaspar

Match Rank:8
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-GCVCCKCCCC-----
ATCCCCGCCCCTAAAA
 A C G T T A C G A G T C T G A C T G A C A G T C A C G T A G T C A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T
G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:GCVCCKCCCC
GCCMCRCCCH
 T A C G A G T C T G A C T G A C A G T C A C G T A G T C A G T C A G T C G A T C
C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T

SP2/MA0516.1/Jaspar

Match Rank:10
Score:0.83
Offset:0
Orientation:forward strand
Alignment:GCVCCKCCCC-----
GCCCCGCCCCCTCCC
 T A C G A G T C T G A C T G A C A G T C A C G T A G T C A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C