p-value: | 1e-20 |
log p-value: | -4.803e+01 |
Information Content per bp: | 1.824 |
Number of Target Sequences with motif | 9.0 |
Percentage of Target Sequences with motif | 1.03% |
Number of Background Sequences with motif | 1.7 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 48.7 +/- 24.9bp |
Average Position of motif in Background | 16.8 +/- 8.4bp |
Strand Bias (log2 ratio + to - strand density) | 1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer
Match Rank: | 1 |
Score: | 0.90 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GGCCACTAGAKGGCAG--- TGGCCACCAGGTGGCACTNT |
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CTCF/MA0139.1/Jaspar
Match Rank: | 2 |
Score: | 0.87 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GGCCACTAGAKGGCAG-- TGGCCACCAGGGGGCGCTA |
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BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer
Match Rank: | 3 |
Score: | 0.84 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GGCCACTAGAKGGCAG----- -GCCASCAGGGGGCGCYVNNG |
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YY1(Zf)/Promoter/Homer
Match Rank: | 4 |
Score: | 0.57 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | GGCCACTAGAKGGCAG- -----CAAGATGGCGGC |
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YY1/MA0095.2/Jaspar
Match Rank: | 5 |
Score: | 0.57 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | GGCCACTAGAKGGCAG- -----CAAGATGGCGGC |
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NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer
Match Rank: | 6 |
Score: | 0.57 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | GGCCACTAGAKGGCAG ----AACAGATGGC-- |
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Nr1h3::Rxra/MA0494.1/Jaspar
Match Rank: | 7 |
Score: | 0.56 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GGCCACTAGAKGGCAG NNGAGGTTACTNNAGGTCA- |
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Rarg(var.2)/MA0860.1/Jaspar
Match Rank: | 8 |
Score: | 0.56 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GGCCACTAGAKGGCAG AAGGTCACGAAAGGTCA- |
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LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer
Match Rank: | 9 |
Score: | 0.55 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GGCCACTAGAKGGCAG GGGTTACTANAGGTCA- |
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THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer
Match Rank: | 10 |
Score: | 0.54 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GGCCACTAGAKGGCAG GGTCANYTGAGGWCA- |
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