Information for 11-GGCAGAGCGC (Motif 19)

A C T G T C A G T G A C C G T A A T C G G T C A A C T G A T G C T A C G G T A C
Reverse Opposite:
A C T G A T G C T A C G A G T C A C G T A T G C A C G T A C T G A G T C G T A C
p-value:1e-7
log p-value:-1.748e+01
Information Content per bp:1.822
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif3.24%
Number of Background Sequences with motif394.0
Percentage of Background Sequences with motif0.85%
Average Position of motif in Targets36.2 +/- 26.1bp
Average Position of motif in Background49.8 +/- 33.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GGCAGAGCGC-
TAGGGCAAAGGTCA
 A C G T A C G T A C G T A C T G T C A G T G A C C G T A A T C G G T C A A C T G A T G C T A C G G T A C A C G T
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GGCAGAGCGC-
GTAGGGCAAAGGTCA
 A C G T A C G T A C G T A C G T A C T G T C A G T G A C C G T A A T C G G T C A A C T G A T G C T A C G G T A C A C G T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GGCAGAGCGC-
TGGGGCAAAGGTCA
 A C G T A C G T A C G T A C T G T C A G T G A C C G T A A T C G G T C A A C T G A T G C T A C G G T A C A C G T
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:4
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GGCAGAGCGC
RGKGGGCGGAGC--
 A C G T A C G T A C G T A C G T A C T G T C A G T G A C C G T A A T C G G T C A A C T G A T G C T A C G G T A C
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGCAGAGCGC
GAGSCCGAGC--
 A C G T A C G T A C T G T C A G T G A C C G T A A T C G G T C A A C T G A T G C T A C G G T A C
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GGCAGAGCGC--
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A C G T A C G T A C T G T C A G T G A C C G T A A T C G G T C A A C T G A T G C T A C G G T A C A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

THAP1/MA0597.1/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GGCAGAGCGC
TNNGGGCAG-----
 A C G T A C G T A C G T A C G T A C T G T C A G T G A C C G T A A T C G G T C A A C T G A T G C T A C G G T A C
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GGCAGAGCGC-
AGGGGTCAGAGGTCA
 A C G T A C G T A C G T A C G T A C T G T C A G T G A C C G T A A T C G G T C A A C T G A T G C T A C G G T A C A C G T
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGCAGAGCGC---
TGGCACCATGCCAA
 A C G T A C T G T C A G T G A C C G T A A T C G G T C A A C T G A T G C T A C G G T A C A C G T A C G T A C G T
A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GGCAGAGCGC----
TTGGCANNNTGCCAAG
 A C G T A C G T A C T G T C A G T G A C C G T A A T C G G T C A A C T G A T G C T A C G G T A C A C G T A C G T A C G T A C G T
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G