Information for 9-TGCTARTGAG (Motif 16)

A C G T A C T G A G T C A C G T C G T A C T G A A C G T A C T G C T G A A C T G
Reverse Opposite:
A G T C A G C T A G T C C G T A A G C T A C G T G T C A A C T G A G T C C G T A
p-value:1e-8
log p-value:-1.934e+01
Information Content per bp:1.912
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif22.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets53.8 +/- 23.7bp
Average Position of motif in Background55.5 +/- 33.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--TGCTARTGAG
WATGCAAATGAG
 A C G T A C G T A C G T A C T G A G T C A C G T C G T A C T G A A C G T A C T G C T G A A C T G
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

POU1F1/MA0784.1/Jaspar

Match Rank:2
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----TGCTARTGAG
AATATGCAAATTAG
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A C T G A A C G T A C T G C T G A A C T G
C G T A C G T A C G A T C T G A G A C T C A T G A G T C G C T A C G T A G T C A C G A T A C G T C G T A C T A G

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TGCTARTGAG
TATGCWAATBAV
 A C G T A C G T A C G T A C T G A G T C A C G T C G T A C T G A A C G T A C T G C T G A A C T G
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

PH0151.1_Pou6f1_1/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TGCTARTGAG-----
GACGATAATGAGCTTGC
 A C G T A C G T A C G T A C T G A G T C A C G T C G T A C T G A A C G T A C T G C T G A A C T G A C G T A C G T A C G T A C G T A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

PH0098.1_Lhx8/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TGCTARTGAG----
CACCGCTAATTAGNNGN
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A C T G A A C G T A C T G C T G A A C T G A C G T A C G T A C G T A C G T
G A T C T G C A G T A C G T A C T C A G T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A C T G A C T G A C T G C G A T

NOTO/MA0710.1/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TGCTARTGAG-
-NNTAATTAGN
 A C G T A C T G A G T C A C G T C G T A C T G A A C G T A C T G C T G A A C T G A C G T
A C G T T A C G A G T C G A C T G T C A C G T A A C G T C A G T C G T A C T A G A T G C

Pou2f3/MA0627.1/Jaspar

Match Rank:7
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----TGCTARTGAG-
TTGTATGCAAATTAGA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A C T G A A C G T A C T G C T G A A C T G A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

PH0145.1_Pou2f3/Jaspar

Match Rank:8
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----TGCTARTGAG-
TTGTATGCAAATTAGA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A C T G A A C G T A C T G C T G A A C T G A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

HOXA2/MA0900.1/Jaspar

Match Rank:9
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TGCTARTGAG-
-GNTAATTANN
 A C G T A C T G A G T C A C G T C G T A C T G A A C G T A C T G C T G A A C T G A C G T
A C G T A T C G A T C G C G A T C T G A G T C A A G C T A C G T C T G A A T C G A T C G

POU3F2/MA0787.1/Jaspar

Match Rank:10
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TGCTARTGAG
TTATGCAAATTA-
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A C T G A A C G T A C T G C T G A A C T G
C G A T G C A T T C G A G A C T C A T G A G T C G C T A C G T A G C T A C G A T A C G T G C T A A C G T