Information for 22-TTGCTSAGCAACM (Motif 40)

A C G T A C G T A C T G A G T C A C G T A T C G C G T A A C T G A G T C C G T A C G T A G T A C G T A C
Reverse Opposite:
A C G T A C T G A C G T A C G T A C T G A G T C A C G T A T C G C G T A A C T G A G T C C G T A C G T A
p-value:1e-6
log p-value:-1.440e+01
Information Content per bp:1.914
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets76.3 +/- 20.8bp
Average Position of motif in Background46.4 +/- 5.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:1
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--TTGCTSAGCAACM
TGTTKCCTAGCAACM
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T A T C G C G T A A C T G A G T C C G T A C G T A G T A C G T A C
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TTGCTSAGCAACM--
CCGCATAGCAACGGA
 A C G T A C G T A C T G A G T C A C G T A T C G C G T A A C T G A G T C C G T A C G T A G T A C G T A C A C G T A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TTGCTSAGCAACM-
--SCCTAGCAACAG
 A C G T A C G T A C T G A G T C A C G T A T C G C G T A A C T G A G T C C G T A C G T A G T A C G T A C A C G T
A C G T A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

PB0055.1_Rfx4_1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TTGCTSAGCAACM--
TACCATAGCAACGGT
 A C G T A C G T A C T G A G T C A C G T A T C G C G T A A C T G A G T C C G T A C G T A G T A C G T A C A C G T A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

PB0054.1_Rfx3_1/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TTGCTSAGCAACM------
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A T C G C G T A A C T G A G T C C G T A C G T A G T A C G T A C A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTGCTSAGCAACM
ATGACTCAGCAD--
 A C G T A C G T A C G T A C T G A G T C A C G T A T C G C G T A A C T G A G T C C G T A C G T A G T A C G T A C
T C G A C G A T A C T G G C T A T A G C C G A T G T A C C G T A A C T G T G A C C G T A C A G T A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TTGCTSAGCAACM-
CTGAGTCAGCAATTT
 A C G T A C G T A C G T A C T G A G T C A C G T A T C G C G T A A C T G A G T C C G T A C G T A G T A C G T A C A C G T
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T

NRL/MA0842.1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TTGCTSAGCAACM
AATTTGCTGAC-----
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A T C G C G T A A C T G A G T C C G T A C G T A G T A C G T A C
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TTGCTSAGCAACM
-TGCTGACTCA--
 A C G T A C G T A C T G A G T C A C G T A T C G C G T A A C T G A G T C C G T A C G T A G T A C G T A C
A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T A C G T

MAFF/MA0495.1/Jaspar

Match Rank:10
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TTGCTSAGCAACM
NAAAANTGCTGACTCAGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A T C G C G T A A C T G A G T C C G T A C G T A G T A C G T A C
C G T A C T G A C G T A C G T A C G T A G C A T G C A T C T A G G T A C C G A T A C T G C G T A A T G C G C A T G A T C C G T A C A T G T A G C