Information for 9-ATGGATGGGC (Motif 24)

C T G A C G A T A C T G A C T G G T C A C G A T T A C G C A T G A C T G A G T C
Reverse Opposite:
A C T G A G T C G T A C A T G C C G T A A C G T G T A C A G T C G C T A A G C T
p-value:1e-9
log p-value:-2.206e+01
Information Content per bp:1.843
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.99%
Number of Background Sequences with motif92.1
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets45.8 +/- 19.9bp
Average Position of motif in Background45.5 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0167.1_Sox13_2/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---ATGGATGGGC----
GTATTGGGTGGGTAATT
 A C G T A C G T A C G T C T G A C G A T A C T G A C T G G T C A C G A T T A C G C A T G A C T G A G T C A C G T A C G T A C G T A C G T
C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---ATGGATGGGC
ATGATKGATGRC-
 A C G T A C G T A C G T C T G A C G A T A C T G A C T G G T C A C G A T T A C G C A T G A C T G A G T C
C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:3
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----ATGGATGGGC--
NTTNTATGAATGTGNNC
 A C G T A C G T A C G T A C G T A C G T C T G A C G A T A C T G A C T G G T C A C G A T T A C G C A T G A C T G A G T C A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

EGR4/MA0733.1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ATGGATGGGC----
AANTGCGTGGGCGTNN
 A C G T A C G T C T G A C G A T A C T G A C T G G T C A C G A T T A C G C A T G A C T G A G T C A C G T A C G T A C G T A C G T
C G T A C G T A C G T A A C G T T C A G T A G C T C A G C A G T T C A G A C T G T C A G G T A C T C A G C A G T C T G A C T G A

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ATGGATGGGC-
-TGGAACAGMA
 C T G A C G A T A C T G A C T G G T C A C G A T T A C G C A T G A C T G A G T C A C G T
A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ATGGATGGGC
TGATTRATGGCY
 A C G T A C G T C T G A C G A T A C T G A C T G G T C A C G A T T A C G C A T G A C T G A G T C
C G A T C T A G T C G A A G C T C G A T C T G A C G T A A G C T A C T G C T A G A T G C G A T C

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ATGGATGGGC
ATGMATATDC
 C T G A C G A T A C T G A C T G G T C A C G A T T A C G C A T G A C T G A G T C
G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ATGGATGGGC-
CGTGGGTGGTCC
 A C G T C T G A C G A T A C T G A C T G G T C A C G A T T A C G C A T G A C T G A G T C A C G T
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

EGR3/MA0732.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ATGGATGGGC----
ANTGCGTGGGCGTNN
 A C G T C T G A C G A T A C T G A C T G G T C A C G A T T A C G C A T G A C T G A G T C A C G T A C G T A C G T A C G T
C G T A C T A G G A C T C T A G A G T C T A C G A C G T T C A G C T A G A T C G G A T C C T A G C A G T C T G A C T A G

EGR2/MA0472.2/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:ATGGATGGGC--
-TGCGTGGGCGT
 C T G A C G A T A C T G A C T G G T C A C G A T T A C G C A T G A C T G A G T C A C G T A C G T
A C G T G A C T T C A G G T A C T C A G A C G T T C A G A C T G T C A G G A T C T C A G C A G T