Information for 8-GGTTTTTGGCTCCCTC (Motif 13)

C T A G A T C G A G C T A C G T A G C T C G A T A C G T A C T G A C T G A G T C A C G T A G T C A G T C A G T C A C G T A G T C
Reverse Opposite:
T A C G G T C A A C T G A C T G C T A G C G T A A C T G A G T C A G T C G T C A C G T A C T G A C G T A C T G A A T G C A G T C
p-value:1e-10
log p-value:-2.428e+01
Information Content per bp:1.820
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.3 +/- 30.8bp
Average Position of motif in Background23.4 +/- 7.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.63
Offset:8
Orientation:forward strand
Alignment:GGTTTTTGGCTCCCTC
--------GCTCCG--
 C T A G A T C G A G C T A C G T A G C T C G A T A C G T A C T G A C T G A G T C A C G T A G T C A G T C A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:2
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GGTTTTTGGCTCCCTC--
--NNNGGGGCGCCCCCNN
 C T A G A T C G A G C T A C G T A G C T C G A T A C G T A C T G A C T G A G T C A C G T A G T C A G T C A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:GGTTTTTGGCTCCCTC
-------GGCGCGCT-
 C T A G A T C G A G C T A C G T A G C T C G A T A C G T A C T G A C T G A G T C A C G T A G T C A G T C A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:GGTTTTTGGCTCCCTC
-------NGCTN----
 C T A G A T C G A G C T A C G T A G C T C G A T A C G T A C T G A C T G A G T C A C G T A G T C A G T C A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

CDX2/MA0465.1/Jaspar

Match Rank:5
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GGTTTTTGGCTCCCTC
-TTTTATGGCTN----
 C T A G A T C G A G C T A C G T A G C T C G A T A C G T A C T G A C T G A G T C A C G T A G T C A G T C A G T C A C G T A G T C
A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.52
Offset:8
Orientation:forward strand
Alignment:GGTTTTTGGCTCCCTC
--------GCTTCC--
 C T A G A T C G A G C T A C G T A G C T C G A T A C G T A C T G A C T G A G T C A C G T A G T C A G T C A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T

PH0064.1_Hoxb9/Jaspar

Match Rank:7
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GGTTTTTGGCTCCCTC
NGANTTTTATGGCTCN---
 A C G T A C G T A C G T C T A G A T C G A G C T A C G T A G C T C G A T A C G T A C T G A C T G A G T C A C G T A G T C A G T C A G T C A C G T A G T C
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GGTTTTTGGCTCCCTC
----NTTGGCANN---
 C T A G A T C G A G C T A C G T A G C T C G A T A C G T A C T G A C T G A G T C A C G T A G T C A G T C A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:9
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:GGTTTTTGGCTCCCTC--
--------GGTCCCGCCC
 C T A G A T C G A G C T A C G T A G C T C G A T A C G T A C T G A C T G A G T C A C G T A G T C A G T C A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:GGTTTTTGGCTCCCTC---
-------GGCTCYAKCAYC
 C T A G A T C G A G C T A C G T A G C T C G A T A C G T A C T G A C T G A G T C A C G T A G T C A G T C A G T C A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C