Information for 6-GTTCCTCCACTGT (Motif 12)

A C T G A C G T A G C T A G T C G T A C A C G T A G T C A G T C C G T A A G T C C G A T A T C G A G C T
Reverse Opposite:
C T G A A T G C C G T A T C A G C G A T A C T G A C T G C G T A A C T G A C T G C T G A C G T A G T A C
p-value:1e-10
log p-value:-2.437e+01
Information Content per bp:1.822
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.4 +/- 18.3bp
Average Position of motif in Background36.1 +/- 20.7bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2/MA0143.3/Jaspar

Match Rank:1
Score:0.60
Offset:6
Orientation:forward strand
Alignment:GTTCCTCCACTGT-
------CCTTTGTT
 A C T G A C G T A G C T A G T C G T A C A C G T A G T C A G T C C G T A A G T C C G A T A T C G A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

ZNF354C/MA0130.1/Jaspar

Match Rank:2
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GTTCCTCCACTGT
----ATCCAC---
 A C T G A C G T A G C T A G T C G T A C A C G T A G T C A G T C C G T A A G T C C G A T A T C G A G C T
A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T

SPIC/MA0687.1/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTTCCTCCACTGT--
-TACTTCCTCTTTTN
 A C T G A C G T A G C T A G T C G T A C A C G T A G T C A G T C C G T A A G T C C G A T A T C G A G C T A C G T A C G T
A C G T C A G T C G T A A G T C A C G T C G A T G T A C T A G C A C G T A T G C C G A T C A G T C A G T G A C T C A G T

SPIB/MA0081.1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTTCCTCCACTGT
-TTCCTCT-----
 A C T G A C G T A G C T A G T C G T A C A C G T A G T C A G T C C G T A A G T C C G A T A T C G A G C T
A C G T C G A T C G A T G A T C A G T C A C G T A T G C C G A T A C G T A C G T A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GTTCCTCCACTGT
CNGTCCTCCC----
 A C G T A C T G A C G T A G C T A G T C G T A C A C G T A G T C A G T C C G T A A G T C C G A T A T C G A G C T
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.57
Offset:6
Orientation:forward strand
Alignment:GTTCCTCCACTGT---
------CCATTGTTYB
 A C T G A C G T A G C T A G T C G T A C A C G T A G T C A G T C C G T A A G T C C G A T A T C G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GTTCCTCCACTGT--
-----NCCATTGTTC
 A C T G A C G T A G C T A G T C G T A C A C G T A G T C A G T C C G T A A G T C C G A T A T C G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:8
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GTTCCTCCACTGT--
-----NCCATTGTTY
 A C T G A C G T A G C T A G T C G T A C A C G T A G T C A G T C C G T A A G T C C G A T A T C G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:9
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GTTCCTCCACTGT-
------CCWTTGTY
 A C T G A C G T A G C T A G T C G T A C A C G T A G T C A G T C C G T A A G T C C G A T A T C G A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GTTCCTCCACTGT-
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C T G A C G T A G C T A G T C G T A C A C G T A G T C A G T C C G T A A G T C C G A T A T C G A G C T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G