Information for 3-CGGCGGAATC (Motif 7)

A G T C A T C G A C T G A G T C A C T G A T C G C T G A C G T A C A G T A T G C
Reverse Opposite:
A T C G G T C A C G A T A G C T A T G C A G T C A C T G A G T C T A G C T C A G
p-value:1e-9
log p-value:-2.085e+01
Information Content per bp:1.842
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.00%
Number of Background Sequences with motif147.9
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets66.1 +/- 25.5bp
Average Position of motif in Background52.0 +/- 37.7bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL011.1_XCPE1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CGGCGGAATC
GGGCGGGACC
 A G T C A T C G A C T G A G T C A C T G A T C G C T G A C G T A C A G T A T G C
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CGGCGGAATC
BTKGGCGGGAAA
 A C G T A C G T A G T C A T C G A C T G A G T C A C T G A T C G C T G A C G T A C A G T A T G C
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CGGCGGAATC-
-DCCGGAARYN
 A G T C A T C G A C T G A G T C A C T G A T C G C T G A C G T A C A G T A T G C A C G T
A C G T C T G A T A G C T G A C T A C G C T A G G T C A G C T A T C A G G A C T T C A G

E2F4/MA0470.1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CGGCGGAATC-
GGGCGGGAAGG
 A G T C A T C G A C T G A G T C A C T G A T C G C T G A C G T A C A G T A T G C A C G T
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CGGCGGAATC
CWGGCGGGAA-
 A C G T A G T C A T C G A C T G A G T C A C T G A T C G C T G A C G T A C A G T A T G C
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CGGCGGAATC-
-RCCGGAARYN
 A G T C A T C G A C T G A G T C A C T G A T C G C T G A C G T A C A G T A T G C A C G T
A C G T T C G A T A G C T G A C C T A G C A T G G C T A G C T A T C A G G A C T C T A G

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CGGCGGAATC-
-RCCGGAAGTD
 A G T C A T C G A C T G A G T C A C T G A T C G C T G A C G T A C A G T A T G C A C G T
A C G T C T G A T A G C T G A C T A C G T C A G G C T A G C T A T C A G A G C T C T A G

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CGGCGGAATC-
-GGCGGGAAAH
 A G T C A T C G A C T G A G T C A C T G A T C G C T G A C G T A C A G T A T G C A C G T
A C G T T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CGGCGGAATC---
-GGGGGAATCCCC
 A G T C A T C G A C T G A G T C A C T G A T C G C T G A C G T A C A G T A T G C A C G T A C G T A C G T
A C G T T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

SPIB/MA0081.1/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CGGCGGAATC
-AGAGGAA--
 A G T C A T C G A C T G A G T C A C T G A T C G C T G A C G T A C A G T A T G C
A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T