Information for 3-CTGTCCTGCCTGCAGG (Motif 3)

A G T C C G A T A T C G A G C T A T G C A T G C G A C T T A C G A T G C A G T C A C G T A C T G A G T C G T C A A T C G A T C G
Reverse Opposite:
T A G C A T G C A C G T A C T G G T A C C G T A A C T G A T C G A G T C C T G A A T C G A T C G C T G A A T G C C G T A C T A G
p-value:1e-11
log p-value:-2.722e+01
Information Content per bp:1.785
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif11.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets48.7 +/- 20.5bp
Average Position of motif in Background65.3 +/- 20.9bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CTGTCCTGCCTGCAGG-
-----CCCCCTGCTGTG
 A G T C C G A T A T C G A G C T A T G C A T G C G A C T T A C G A T G C A G T C A C G T A C T G A G T C G T C A A T C G A T C G A C G T
A C G T A C G T A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CTGTCCTGCCTGCAGG--
---GGCCYCCTGCTGDGH
 A G T C C G A T A T C G A G C T A T G C A T G C G A C T T A C G A T G C A G T C A C G T A C T G A G T C G T C A A T C G A T C G A C G T A C G T
A C G T A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CTGTCCTGCCTGCAGG-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A G T C C G A T A T C G A G C T A T G C A T G C G A C T T A C G A T G C A G T C A C G T A C T G A G T C G T C A A T C G A T C G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

E2F6/MA0471.1/Jaspar

Match Rank:4
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CTGTCCTGCCTGCAGG
NCTTCCCGCCC-----
 A G T C C G A T A T C G A G C T A T G C A T G C G A C T T A C G A T G C A G T C A C G T A C T G A G T C G T C A A T C G A T C G
A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:5
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:CTGTCCTGCCTGCAGG--
------TGCCCTNGGGCA
 A G T C C G A T A T C G A G C T A T G C A T G C G A C T T A C G A T G C A G T C A C G T A C T G A G T C G T C A A T C G A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:6
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:CTGTCCTGCCTGCAGG--
------TGCCCNGGGGCA
 A G T C C G A T A T C G A G C T A T G C A T G C G A C T T A C G A T G C A G T C A C G T A C T G A G T C G T C A A T C G A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

TFAP2C/MA0524.2/Jaspar

Match Rank:7
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:CTGTCCTGCCTGCAGG--
------TGCCCTNGGGCA
 A G T C C G A T A T C G A G C T A T G C A T G C G A C T T A C G A T G C A G T C A C G T A C T G A G T C G T C A A T C G A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

SP2/MA0516.1/Jaspar

Match Rank:8
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CTGTCCTGCCTGCAGG-
--GCCCCGCCCCCTCCC
 A G T C C G A T A T C G A G C T A T G C A T G C G A C T T A C G A T G C A G T C A C G T A C T G A G T C G T C A A T C G A T C G A C G T
A C G T A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

REST/MA0138.2/Jaspar

Match Rank:9
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----CTGTCCTGCCTGCAGG-
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A C G T A C G T A G T C C G A T A T C G A G C T A T G C A T G C G A C T T A C G A T G C A G T C A C G T A C T G A G T C G T C A A T C G A T C G A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CTGTCCTGCCTGCAGG
CNGTCCTCCC------
 A G T C C G A T A T C G A G C T A T G C A T G C G A C T T A C G A T G C A G T C A C G T A C T G A G T C G T C A A T C G A T C G
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T