Information for 1-CGGGARAGGTAGT (Motif 1)

A G T C A C T G A T C G A C T G C T G A T C A G G C T A A T C G A C T G A C G T C T G A A C T G A C G T
Reverse Opposite:
G T C A A G T C A G C T G T C A G T A C T A G C C G A T A G T C A G C T A G T C A T G C A G T C C T A G
p-value:1e-16
log p-value:-3.857e+01
Information Content per bp:1.765
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.00%
Number of Background Sequences with motif50.3
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets48.9 +/- 27.8bp
Average Position of motif in Background48.9 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:CGGGARAGGTAGT
-GGGAATTGTAGT
 A G T C A C T G A T C G A C T G C T G A T C A G G C T A A T C G A C T G A C G T C T G A A C T G A C G T
A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:2
Score:0.76
Offset:-6
Orientation:reverse strand
Alignment:------CGGGARAGGTAGT-
GCMTBCTGGGAGTTGTAGTY
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A T C G A C T G C T G A T C A G G C T A A T C G A C T G A C G T C T G A A C T G A C G T A C G T
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:3
Score:0.72
Offset:-6
Orientation:reverse strand
Alignment:------CGGGARAGGTAGT-
GCATTCTGGGAATTGTAGTT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A T C G A C T G C T G A T C A G G C T A A T C G A C T G A C G T C T G A A C T G A C G T A C G T
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CGGGARAGGTAGT
TGGCGGGAAAHB----
 A C G T A C G T A C G T A G T C A C T G A T C G A C T G C T G A T C A G G C T A A T C G A C T G A C G T C T G A A C T G A C G T
C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G A C G T A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CGGGARAGGTAGT
GGCGGGAARN-----
 A C G T A C G T A G T C A C T G A T C G A C T G C T G A T C A G G C T A A T C G A C T G A C G T C T G A A C T G A C G T
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CGGGARAGGTAGT
GGGCGGGAAGG-----
 A C G T A C G T A C G T A G T C A C T G A T C G A C T G C T G A T C A G G C T A A T C G A C T G A C G T C T G A A C T G A C G T
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T A C G T A C G T A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:7
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----CGGGARAGGTAGT
NNNACCGAGAGTNNN---
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A T C G A C T G C T G A T C A G G C T A A T C G A C T G A C G T C T G A A C T G A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CGGGARAGGTAGT
GGGCGGGAAGG-----
 A C G T A C G T A C G T A G T C A C T G A T C G A C T G C T G A T C A G G C T A A T C G A C T G A C G T C T G A A C T G A C G T
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T A C G T A C G T A C G T

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CGGGARAGGTAGT
GGCGGGAAAH-----
 A C G T A C G T A G T C A C T G A T C G A C T G C T G A T C A G G C T A A T C G A C T G A C G T C T G A A C T G A C G T
T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T A C G T A C G T A C G T A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:10
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CGGGARAGGTAGT
BTKGGCGGGAAA------
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A T C G A C T G C T G A T C A G G C T A A T C G A C T G A C G T C T G A A C T G A C G T
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T