Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer | 1e-13 | -3.149e+01 | 0.0000 | 102.0 | 12.81% | 2612.1 | 5.64% | motif file (matrix) |
svg |
2 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-12 | -2.945e+01 | 0.0000 | 68.0 | 8.54% | 1435.5 | 3.10% | motif file (matrix) |
svg |
3 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-12 | -2.766e+01 | 0.0000 | 75.0 | 9.42% | 1745.6 | 3.77% | motif file (matrix) |
svg |
4 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-11 | -2.762e+01 | 0.0000 | 40.0 | 5.03% | 599.3 | 1.29% | motif file (matrix) |
svg |
5 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-11 | -2.709e+01 | 0.0000 | 48.0 | 6.03% | 846.5 | 1.83% | motif file (matrix) |
svg |
6 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-10 | -2.415e+01 | 0.0000 | 65.0 | 8.17% | 1510.7 | 3.26% | motif file (matrix) |
svg |
7 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-9 | -2.223e+01 | 0.0000 | 56.0 | 7.04% | 1255.6 | 2.71% | motif file (matrix) |
svg |
8 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-9 | -2.205e+01 | 0.0000 | 70.0 | 8.79% | 1780.0 | 3.84% | motif file (matrix) |
svg |
9 |
| HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer | 1e-8 | -1.876e+01 | 0.0000 | 59.0 | 7.41% | 1500.4 | 3.24% | motif file (matrix) |
svg |
10 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-7 | -1.772e+01 | 0.0000 | 72.0 | 9.05% | 2065.3 | 4.46% | motif file (matrix) |
svg |
11 |
| c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-6 | -1.586e+01 | 0.0000 | 35.0 | 4.40% | 737.0 | 1.59% | motif file (matrix) |
svg |
12 |
| Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer | 1e-6 | -1.557e+01 | 0.0000 | 44.0 | 5.53% | 1067.7 | 2.31% | motif file (matrix) |
svg |
13 |
| Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer | 1e-6 | -1.524e+01 | 0.0000 | 35.0 | 4.40% | 756.7 | 1.63% | motif file (matrix) |
svg |
14 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-6 | -1.413e+01 | 0.0000 | 266.0 | 33.42% | 11900.1 | 25.69% | motif file (matrix) |
svg |
15 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-5 | -1.323e+01 | 0.0000 | 25.0 | 3.14% | 482.4 | 1.04% | motif file (matrix) |
svg |
16 |
| Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer | 1e-5 | -1.301e+01 | 0.0001 | 23.0 | 2.89% | 424.3 | 0.92% | motif file (matrix) |
svg |
17 |
| JunD(bZIP)/K562-JunD-ChIP-Seq/Homer | 1e-5 | -1.278e+01 | 0.0001 | 15.0 | 1.88% | 198.5 | 0.43% | motif file (matrix) |
svg |
18 |
| Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer | 1e-5 | -1.222e+01 | 0.0001 | 41.0 | 5.15% | 1097.7 | 2.37% | motif file (matrix) |
svg |
19 |
| Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer | 1e-5 | -1.162e+01 | 0.0002 | 228.0 | 28.64% | 10230.8 | 22.09% | motif file (matrix) |
svg |
20 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-4 | -1.111e+01 | 0.0003 | 52.0 | 6.53% | 1606.4 | 3.47% | motif file (matrix) |
svg |
21 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-4 | -1.108e+01 | 0.0003 | 236.0 | 29.65% | 10738.7 | 23.18% | motif file (matrix) |
svg |
22 |
| CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer | 1e-4 | -9.279e+00 | 0.0015 | 49.0 | 6.16% | 1595.3 | 3.44% | motif file (matrix) |
svg |
23 |
| HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer | 1e-3 | -9.029e+00 | 0.0019 | 57.0 | 7.16% | 1968.3 | 4.25% | motif file (matrix) |
svg |
24 |
| Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer | 1e-3 | -8.944e+00 | 0.0020 | 114.0 | 14.32% | 4704.8 | 10.16% | motif file (matrix) |
svg |
25 |
| Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer | 1e-3 | -8.647e+00 | 0.0026 | 133.0 | 16.71% | 5701.9 | 12.31% | motif file (matrix) |
svg |
26 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-3 | -7.850e+00 | 0.0055 | 99.0 | 12.44% | 4089.9 | 8.83% | motif file (matrix) |
svg |
27 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-3 | -7.328e+00 | 0.0089 | 65.0 | 8.17% | 2488.3 | 5.37% | motif file (matrix) |
svg |
28 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-3 | -7.249e+00 | 0.0092 | 107.0 | 13.44% | 4568.9 | 9.86% | motif file (matrix) |
svg |
29 |
| Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer | 1e-3 | -7.049e+00 | 0.0109 | 22.0 | 2.76% | 596.4 | 1.29% | motif file (matrix) |
svg |
30 |
| Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer | 1e-2 | -6.831e+00 | 0.0131 | 21.0 | 2.64% | 567.2 | 1.22% | motif file (matrix) |
svg |
31 |
| HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer | 1e-2 | -6.777e+00 | 0.0134 | 12.0 | 1.51% | 240.6 | 0.52% | motif file (matrix) |
svg |
32 |
| Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer | 1e-2 | -6.759e+00 | 0.0134 | 23.0 | 2.89% | 650.7 | 1.40% | motif file (matrix) |
svg |
33 |
| Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer | 1e-2 | -6.289e+00 | 0.0205 | 116.0 | 14.57% | 5168.8 | 11.16% | motif file (matrix) |
svg |
34 |
| MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer | 1e-2 | -6.230e+00 | 0.0211 | 17.0 | 2.14% | 439.2 | 0.95% | motif file (matrix) |
svg |
35 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-2 | -5.725e+00 | 0.0339 | 47.0 | 5.90% | 1791.0 | 3.87% | motif file (matrix) |
svg |
36 |
| IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer | 1e-2 | -5.604e+00 | 0.0372 | 29.0 | 3.64% | 974.1 | 2.10% | motif file (matrix) |
svg |
37 |
| ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -5.386e+00 | 0.0451 | 44.0 | 5.53% | 1682.6 | 3.63% | motif file (matrix) |
svg |
38 |
| MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer | 1e-2 | -5.273e+00 | 0.0491 | 56.0 | 7.04% | 2273.5 | 4.91% | motif file (matrix) |
svg |
39 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-2 | -5.174e+00 | 0.0529 | 20.0 | 2.51% | 613.7 | 1.32% | motif file (matrix) |
svg |
40 |
| Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer | 1e-2 | -5.122e+00 | 0.0543 | 49.0 | 6.16% | 1949.6 | 4.21% | motif file (matrix) |
svg |
41 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-2 | -4.885e+00 | 0.0671 | 47.0 | 5.90% | 1878.7 | 4.06% | motif file (matrix) |
svg |
42 |
| PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer | 1e-2 | -4.805e+00 | 0.0709 | 9.0 | 1.13% | 199.0 | 0.43% | motif file (matrix) |
svg |
43 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-2 | -4.800e+00 | 0.0709 | 51.0 | 6.41% | 2083.5 | 4.50% | motif file (matrix) |
svg |
44 |
| MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer | 1e-2 | -4.630e+00 | 0.0807 | 27.0 | 3.39% | 958.6 | 2.07% | motif file (matrix) |
svg |
45 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-2 | -4.627e+00 | 0.0807 | 48.0 | 6.03% | 1956.5 | 4.22% | motif file (matrix) |
svg |