Information for 12-AATCCACCCAGGA (Motif 20)

C T G A C T G A A C G T A G T C A G T C C G T A A G T C G T A C A G T C C G T A A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C A C G T A C T G A C T G A C T G A C G T A C T G A C T G C G T A A G C T A G C T
p-value:1e-8
log p-value:-1.945e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.2 +/- 37.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AATCCACCCAGGA
GGACCACCCACG-
 C T G A C T G A A C G T A G T C A G T C C G T A A G T C G T A C A G T C C G T A A C T G A C T G C G T A
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AATCCACCCAGGA
-ATCCAC------
 C T G A C T G A A C G T A G T C A G T C C G T A A G T C G T A C A G T C C G T A A C T G A C T G C G T A
A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--AATCCACCCAGGA
SSAATCCACANN---
 A C G T A C G T C T G A C T G A A C G T A G T C A G T C C G T A A G T C G T A C A G T C C G T A A C T G A C T G C G T A
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AATCCACCCAGGA
TCCAATCCACA-----
 A C G T A C G T A C G T C T G A C T G A A C G T A G T C A G T C C G T A A G T C G T A C A G T C C G T A A C T G A C T G C G T A
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---AATCCACCCAGGA-
ANNTNCCCACCCANNAC
 A C G T A C G T A C G T C T G A C T G A A C G T A G T C A G T C C G T A A G T C G T A C A G T C C G T A A C T G A C T G C G T A A C G T
G T C A C G T A C G A T C G A T C G T A G T A C G T A C T A G C C G T A G A T C G T A C G T A C C T G A C T G A G A C T G C T A G A T C

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AATCCACCCAGGA
-AGCCACTCAAG-
 C T G A C T G A A C G T A G T C A G T C C G T A A G T C G T A C A G T C C G T A A C T G A C T G C G T A
A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T

PB0204.1_Zfp740_2/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AATCCACCCAGGA--
AAATTCCCCCCGGAAGT
 A C G T A C G T C T G A C T G A A C G T A G T C A G T C C G T A A G T C G T A C A G T C C G T A A C T G A C T G C G T A A C G T A C G T
C T G A C T G A C T G A C A G T G C A T G A T C G A T C A G T C A G T C A T G C A T G C T A C G A T C G C T G A C T G A T C A G A G C T

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AATCCACCCAGGA--
CAAATCCAGACATCACA
 A C G T A C G T C T G A C T G A A C G T A G T C A G T C C G T A A G T C G T A C A G T C C G T A A C T G A C T G C G T A A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:9
Score:0.54
Offset:7
Orientation:forward strand
Alignment:AATCCACCCAGGA----
-------ACAGGAAGTG
 C T G A C T G A A C G T A G T C A G T C C G T A A G T C G T A C A G T C C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.54
Offset:6
Orientation:forward strand
Alignment:AATCCACCCAGGA---
------AACAGGAAGT
 C T G A C T G A A C G T A G T C A G T C C G T A A G T C G T A C A G T C C G T A A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T