Information for 9-TGAAAAGCTCTCA (Motif 18)

C G A T C A T G C T G A G T C A G T C A C G T A A C T G G A T C G A C T A G T C G C A T A T G C G C T A
Reverse Opposite:
C G A T A T C G C G T A C T A G C T G A C T A G A G T C C G A T A C G T A C G T A G C T G T A C C G T A
p-value:1e-9
log p-value:-2.101e+01
Information Content per bp:1.749
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.51%
Number of Background Sequences with motif58.0
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets51.7 +/- 26.1bp
Average Position of motif in Background47.8 +/- 33.0bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:1
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGAAAAGCTCTCA
ANGNAAAGGTCA--
 A C G T C G A T C A T G C T G A G T C A G T C A C G T A A C T G G A T C G A C T A G T C G C A T A T G C G C T A
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TGAAAAGCTCTCA--
----AGCCACTCAAG
 C G A T C A T G C T G A G T C A G T C A C G T A A C T G G A T C G A C T A G T C G C A T A T G C G C T A A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

Rarg/MA0859.1/Jaspar

Match Rank:3
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TGAAAAGCTCTCA
AAGGTCAAAAGGTCAA-
 A C G T A C G T A C G T A C G T C G A T C A T G C T G A G T C A G T C A C G T A A C T G G A T C G A C T A G T C G C A T A T G C G C T A
T C G A T C G A C T A G A C T G A C G T A G T C T C G A C G T A C T G A T C G A A C T G A C T G A C G T A G T C T C G A G C T A A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TGAAAAGCTCTCA--
TCTCAAAGGTCACCTG
 A C G T C G A T C A T G C T G A G T C A G T C A C G T A A C T G G A T C G A C T A G T C G C A T A T G C G C T A A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:5
Score:0.56
Offset:4
Orientation:forward strand
Alignment:TGAAAAGCTCTCA-
----AAGCACTTAA
 C G A T C A T G C T G A G T C A G T C A C G T A A C T G G A T C G A C T A G T C G C A T A T G C G C T A A C G T
A C G T A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

Nr2e3/MA0164.1/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TGAAAAGCTCTCA
---CAAGCTT---
 C G A T C A T G C T G A G T C A G T C A C G T A A C T G G A T C G A C T A G T C G C A T A T G C G C T A
A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T

Rarb/MA0857.1/Jaspar

Match Rank:7
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----TGAAAAGCTCTCA
AAAGGTCAAAAGGTCA--
 A C G T A C G T A C G T A C G T A C G T C G A T C A T G C T G A G T C A G T C A C G T A A C T G G A T C G A C T A G T C G C A T A T G C G C T A
G C T A C T G A T C G A A C T G A C T G C A G T A T G C C T G A G C T A C T G A C T G A C T A G A C T G A G C T A G T C C T G A A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TGAAAAGCTCTCA--
GGCAAAAGTCCAATAA
 A C G T C G A T C A T G C T G A G T C A G T C A C G T A A C T G G A T C G A C T A G T C G C A T A T G C G C T A A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

NR4A2/MA0160.1/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TGAAAAGCTCTCA
----AAGGTCAC-
 C G A T C A T G C T G A G T C A G T C A C G T A A C T G G A T C G A C T A G T C G C A T A T G C G C T A
A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TGAAAAGCTCTCA
NATGGAAAAN-----
 A C G T A C G T C G A T C A T G C T G A G T C A G T C A C G T A A C T G G A T C G A C T A G T C G C A T A T G C G C T A
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T