Information for 6-TCACTCTGCC (Motif 17)

A C G T A T G C G C T A T A G C A G C T G T A C G C A T C A T G G A T C T A G C
Reverse Opposite:
A T C G C T A G G T A C C G T A A C T G T C G A A T C G C A G T A T C G T G C A
p-value:1e-10
log p-value:-2.316e+01
Information Content per bp:1.682
Number of Target Sequences with motif65.0
Percentage of Target Sequences with motif8.17%
Number of Background Sequences with motif1547.4
Percentage of Background Sequences with motif3.34%
Average Position of motif in Targets47.7 +/- 27.9bp
Average Position of motif in Background50.9 +/- 34.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TCACTCTGCC
MRSCACTYAA--
 A C G T A C G T A C G T A T G C G C T A T A G C A G C T G T A C G C A T C A T G G A T C T A G C
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TCACTCTGCC
TCAGTCTT--
 A C G T A T G C G C T A T A G C A G C T G T A C G C A T C A T G G A T C T A G C
C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TCACTCTGCC-
NAGGTCACNNTGACC
 A C G T A C G T A C G T A C G T A C G T A T G C G C T A T A G C A G C T G T A C G C A T C A T G G A T C T A G C A C G T
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

ESR2/MA0258.2/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TCACTCTGCC--
AGGTCACCCTGACCT
 A C G T A C G T A C G T A C G T A T G C G C T A T A G C A G C T G T A C G C A T C A T G G A T C T A G C A C G T A C G T
C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TCACTCTGCC
AGCCACTCAAG-
 A C G T A C G T A C G T A T G C G C T A T A G C A G C T G T A C G C A T C A T G G A T C T A G C
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TCACTCTGCC
AASCACTCAA--
 A C G T A C G T A C G T A T G C G C T A T A G C A G C T G T A C G C A T C A T G G A T C T A G C
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TCACTCTGCC
-CACGCA---
 A C G T A T G C G C T A T A G C A G C T G T A C G C A T C A T G G A T C T A G C
A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TCACTCTGCC
AGTCACGC----
 A C G T A C G T A C G T A T G C G C T A T A G C A G C T G T A C G C A T C A T G G A T C T A G C
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:9
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TCACTCTGCC
SCTGTCAVTCAV--
 A C G T A C G T A C G T A C G T A C G T A T G C G C T A T A G C A G C T G T A C G C A T C A T G G A T C T A G C
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TCACTCTGCC
NCTGTCAATCAN--
 A C G T A C G T A C G T A C G T A C G T A T G C G C T A T A G C A G C T G T A C G C A T C A T G G A T C T A G C
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T