Information for 8-GGCATCCMSYAGT (Motif 17)

A C T G A T C G A G T C G T C A A C G T A G T C A G T C G T A C A T C G A G T C C G T A A T C G A G C T
Reverse Opposite:
C T G A A T G C C G A T C T A G A T G C C A T G A C T G C T A G C G T A A C G T A C T G A T G C A G T C
p-value:1e-6
log p-value:-1.572e+01
Information Content per bp:1.848
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif2.44%
Number of Background Sequences with motif104.0
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets62.7 +/- 21.8bp
Average Position of motif in Background52.3 +/- 33.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIC2/MA0738.1/Jaspar

Match Rank:1
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GGCATCCMSYAGT
NGTGGGCAT--------
 A C G T A C G T A C G T A C G T A C T G A T C G A G T C G T C A A C G T A G T C A G T C G T A C A T C G A G T C C G T A A T C G A G C T
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:2
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GGCATCCMSYAGT
GGTTGGCAT--------
 A C G T A C G T A C G T A C G T A C T G A T C G A G T C G T C A A C G T A G T C A G T C G T A C A T C G A G T C C G T A A T C G A G C T
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:3
Score:0.55
Offset:-7
Orientation:reverse strand
Alignment:-------GGCATCCMSYAGT
NNNNTTGGGCACNNCN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G A G T C G T C A A C G T A G T C A G T C G T A C A T C G A G T C C G T A A T C G A G C T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C A C G T A C G T A C G T A C G T

PB0098.1_Zfp410_1/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GGCATCCMSYAGT-
NNNTCCATCCCATAANN
 A C G T A C G T A C G T A C T G A T C G A G T C G T C A A C G T A G T C A G T C G T A C A T C G A G T C C G T A A T C G A G C T A C G T
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A

ZNF410/MA0752.1/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGCATCCMSYAGT----
TCCATCCCATAATACTC
 A C T G A T C G A G T C G T C A A C G T A G T C A G T C G T A C A T C G A G T C C G T A A T C G A G C T A C G T A C G T A C G T A C G T
A C G T T G A C G A T C G C T A C A G T G T A C G T A C A T G C G T C A A G C T G T C A T C G A G A C T C T G A G T A C A G C T G T A C

PB0156.1_Plagl1_2/Jaspar

Match Rank:6
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GGCATCCMSYAGT
NNNNGGTACCCCCCANN
 A C G T A C G T A C G T A C G T A C T G A T C G A G T C G T C A A C G T A G T C A G T C G T A C A T C G A G T C C G T A A T C G A G C T
G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GGCATCCMSYAGT
CCWGGAATGY------
 A C G T A C G T A C G T A C T G A T C G A G T C G T C A A C G T A G T C A G T C G T A C A T C G A G T C C G T A A T C G A G C T
T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GGCATCCMSYAGT
GGGGGAATCCCC----
 A C G T A C G T A C G T A C T G A T C G A G T C G T C A A C G T A G T C A G T C G T A C A T C G A G T C C G T A A T C G A G C T
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GGCATCCMSYAGT--
GGCCYCCTGCTGDGH
 A C T G A T C G A G T C G T C A A C G T A G T C A G T C G T A C A T C G A G T C C G T A A T C G A G C T A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GGCATCCMSYAGT
-ACATCCTGNT--
 A C T G A T C G A G T C G T C A A C G T A G T C A G T C G T A C A T C G A G T C C G T A A T C G A G C T
A C G T C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T A C G T