Information for 17-TCTCAAADACATR (Motif 14)

A C G T A G T C A C G T T G A C C T G A C G T A C G T A C A T G C T G A G T A C G C T A G A C T C T G A
Reverse Opposite:
A G C T C T G A C G A T A C T G G A C T G T A C A C G T G C A T G A C T A C T G T G C A C T A G T C G A
p-value:1e-14
log p-value:-3.236e+01
Information Content per bp:1.677
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif3.74%
Number of Background Sequences with motif89.7
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets56.0 +/- 24.9bp
Average Position of motif in Background44.8 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TCTCAAADACATR
CGGTTTCAAA------
 A C G T A C G T A C G T A C G T A G T C A C G T T G A C C T G A C G T A C G T A C A T G C T G A G T A C G C T A G A C T C T G A
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TCTCAAADACATR
ACATCAAAGG----
 A C G T A C G T A G T C A C G T T G A C C T G A C G T A C G T A C A T G C T G A G T A C G C T A G A C T C T G A
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

PH0068.1_Hoxc13/Jaspar

Match Rank:3
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TCTCAAADACATR
AAAGCTCGTAAAATTT
 A C G T A C G T A C G T A C G T A G T C A C G T T G A C C T G A C G T A C G T A C A T G C T G A G T A C G C T A G A C T C T G A
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TCTCAAADACATR
ACATCAAAGGNA--
 A C G T A C G T A G T C A C G T T G A C C T G A C G T A C G T A C A T G C T G A G T A C G C T A G A C T C T G A
C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:5
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TCTCAAADACATR
AAAGATCAAAGGAA--
 A C G T A C G T A C G T A C G T A G T C A C G T T G A C C T G A C G T A C G T A C A T G C T G A G T A C G C T A G A C T C T G A
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A A C G T A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:6
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----TCTCAAADACATR
AGTATTCTCGGTTGC---
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T T G A C C T G A C G T A C G T A C A T G C T G A G T A C G C T A G A C T C T G A
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C A C G T A C G T A C G T

PH0148.1_Pou3f3/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TCTCAAADACATR----
TNNATTATGCATANNTT
 A C G T A G T C A C G T T G A C C T G A C G T A C G T A C A T G C T G A G T A C G C T A G A C T C T G A A C G T A C G T A C G T A C G T
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

PB0083.1_Tcf7_1/Jaspar

Match Rank:8
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----TCTCAAADACATR
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T T G A C C T G A C G T A C G T A C A T G C T G A G T A C G C T A G A C T C T G A
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

PH0048.1_Hoxa13/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---TCTCAAADACATR
AAACCTCGTAAAATTT
 A C G T A C G T A C G T A C G T A G T C A C G T T G A C C T G A C G T A C G T A C A T G C T G A G T A C G C T A G A C T C T G A
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

LIN54/MA0619.1/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TCTCAAADACATR
NATTCAAAT-----
 A C G T A C G T A G T C A C G T T G A C C T G A C G T A C G T A C A T G C T G A G T A C G C T A G A C T C T G A
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T