Information for 10-RYTAAAGGCT (Motif 8)

T C G A G A T C A G C T C T G A C G T A C G T A C T A G C A T G A G T C A G C T
Reverse Opposite:
C T G A C T A G G T A C A G T C A C G T A C G T A G C T T C G A C T A G A G C T
p-value:1e-86
log p-value:-1.986e+02
Information Content per bp:1.758
Number of Target Sequences with motif97.0
Percentage of Target Sequences with motif20.64%
Number of Background Sequences with motif539.4
Percentage of Background Sequences with motif1.18%
Average Position of motif in Targets51.1 +/- 23.2bp
Average Position of motif in Background50.1 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BARHL2/MA0635.1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:RYTAAAGGCT
GCTAAACGGT
 T C G A G A T C A G C T C T G A C G T A C G T A C T A G C A T G A G T C A G C T
T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:RYTAAAGGCT
GTTAATGGCC
 T C G A G A T C A G C T C T G A C G T A C G T A C T A G C A T G A G T C A G C T
A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:RYTAAAGGCT-
-NTAATKGTTT
 T C G A G A T C A G C T C T G A C G T A C G T A C T A G C A T G A G T C A G C T A C G T
A C G T A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T

Barhl1/MA0877.1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:RYTAAAGGCT
GCTAATTGCT
 T C G A G A T C A G C T C T G A C G T A C G T A C T A G C A T G A G T C A G C T
A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:RYTAAAGGCT
-CTAATKGV-
 T C G A G A T C A G C T C T G A C G T A C G T A C T A G C A T G A G T C A G C T
A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:RYTAAAGGCT-
------NGCTN
 T C G A G A T C A G C T C T G A C G T A C G T A C T A G C A T G A G T C A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:RYTAAAGGCT-
-NTCAAGGTCA
 T C G A G A T C A G C T C T G A C G T A C G T A C T A G C A T G A G T C A G C T A C G T
A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

Nr5a2/MA0505.1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--RYTAAAGGCT---
AAGTTCAAGGTCAGC
 A C G T A C G T T C G A G A T C A G C T C T G A C G T A C G T A C T A G C A T G A G T C A G C T A C G T A C G T A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:RYTAAAGGCT-
-BTCAAGGTCA
 T C G A G A T C A G C T C T G A C G T A C G T A C T A G C A T G A G T C A G C T A C G T
A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

PB0046.1_Mybl1_1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--RYTAAAGGCT-----
NNANTAACGGTTNNNAN
 A C G T A C G T T C G A G A T C A G C T C T G A C G T A C G T A C T A G C A T G A G T C A G C T A C G T A C G T A C G T A C G T A C G T
G C T A C T G A C G T A C G A T G A C T C T G A T C G A A G T C A T C G C A T G G A C T G A C T C G A T G A C T G A T C G C T A C T G A