Information for 24-ATGTCCTGCTTGA (Motif 24)

G T C A A C G T A C T G A C G T A G T C A G T C C G A T A C T G A G T C A C G T A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A C G T A A C T G A G T C C G T A A C T G A C T G C G T A T G A C C G T A A C G T
p-value:1e-4
log p-value:-1.139e+01
Information Content per bp:1.934
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.5 +/- 23.7bp
Average Position of motif in Background45.9 +/- 14.2bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ATGTCCTGCTTGA
ATTTCCTGTN---
 G T C A A C G T A C T G A C G T A G T C A G T C C G A T A C T G A G T C A C G T A C G T A C T G C G T A
T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G A C G T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ATGTCCTGCTTGA
ATTTCCTGTN---
 G T C A A C G T A C T G A C G T A G T C A G T C C G A T A C T G A G T C A C G T A C G T A C T G C G T A
C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ATGTCCTGCTTGA
ACATCCTGNT---
 G T C A A C G T A C T G A C G T A G T C A G T C C G A T A C T G A G T C A C G T A C G T A C T G C G T A
C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T A C G T A C G T

PAX1/MA0779.1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ATGTCCTGCTTGA-----
-CGTCACGCATGACTGCA
 G T C A A C G T A C T G A C G T A G T C A G T C C G A T A C T G A G T C A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A T G C C A T G G C A T G A T C T G C A G A T C C A T G A T G C G C T A G A C T A T C G T C G A T A G C G A C T C A T G T G A C G T C A

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:ATGTCCTGCTTGA
ACTTCCTGNT---
 G T C A A C G T A C T G A C G T A G T C A G T C C G A T A C T G A G T C A C G T A C G T A C T G C G T A
C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A C T G G C A T A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:ATGTCCTGCTTGA----
--GTCATGCHTGRCTGS
 G T C A A C G T A C T G A C G T A G T C A G T C C G A T A C T G A G T C A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ATGTCCTGCTTGA
NNAYTTCCTGHN---
 A C G T A C G T G T C A A C G T A C T G A C G T A G T C A G T C C G A T A C T G A G T C A C G T A C G T A C T G C G T A
A T G C A G T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A C G T A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ATGTCCTGCTTGA
CACTTCCTGT----
 A C G T G T C A A C G T A C T G A C G T A G T C A G T C C G A T A C T G A G T C A C G T A C G T A C T G C G T A
A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T A C G T A C G T A C G T

Pax6/MA0069.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ATGTCCTGCTTGA-
AANTCATGCGTGAA
 G T C A A C G T A C T G A C G T A G T C A G T C C G A T A C T G A G T C A C G T A C G T A C T G C G T A A C G T
G T C A T C G A A G T C G A C T A T G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A T C G A

PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:ATGTCCTGCTTGA---------
--TTTMCGCTTSABTGAACACN
 G T C A A C G T A C T G A C G T A G T C A G T C C G A T A C T G A G T C A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T C A G T G A C T T G A C G A T C T C A G A T G C G C A T A G C T T A C G C T G A A T C G G A C T C T A G T G C A T C G A A G T C G C T A A T G C T C G A