Information for 1-AGAGAAMCCATACDRR (Motif 1)

C G T A T C A G G C T A C T A G T C G A T C G A G T C A G A T C G A T C G T C A G A C T C G T A G A T C C T A G T C G A C T G A
Reverse Opposite:
G A C T A G C T G A T C C T A G G C A T C T G A C A G T C T A G C T A G C A G T A G C T A G C T G A T C C G A T A G T C G C A T
p-value:1e-410
log p-value:-9.457e+02
Information Content per bp:1.642
Number of Target Sequences with motif204.0
Percentage of Target Sequences with motif43.40%
Number of Background Sequences with motif93.7
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets51.4 +/- 27.3bp
Average Position of motif in Background48.0 +/- 38.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.48
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0037.1_Hdx/Jaspar

Match Rank:1
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AGAGAAMCCATACDRR
AAGGCGAAATCATCGCA-
 A C G T A C G T C G T A T C A G G C T A C T A G T C G A T C G A G T C A G A T C G A T C G T C A G A C T C G T A G A T C C T A G T C G A C T G A
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:2
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----AGAGAAMCCATACDRR
TTGACCGAGAATTCC------
 A C G T A C G T A C G T A C G T A C G T C G T A T C A G G C T A C T A G T C G A T C G A G T C A G A T C G A T C G T C A G A C T C G T A G A T C C T A G T C G A C T G A
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGAGAAMCCATACDRR
ACTGAAACCA------
 C G T A T C A G G C T A C T A G T C G A T C G A G T C A G A T C G A T C G T C A G A C T C G T A G A T C C T A G T C G A C T G A
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

IRF2/MA0051.1/Jaspar

Match Rank:4
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----AGAGAAMCCATACDRR
GGAAAGCGAAACCAAAAC--
 A C G T A C G T A C G T A C G T C G T A T C A G G C T A C T A G T C G A T C G A G T C A G A T C G A T C G T C A G A C T C G T A G A T C C T A G T C G A C T G A
A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C A C G T A C G T

PB0034.1_Irf4_1/Jaspar

Match Rank:5
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---AGAGAAMCCATACDRR
CGTATCGAAACCAAA----
 A C G T A C G T A C G T C G T A T C A G G C T A C T A G T C G A T C G A G T C A G A T C G A T C G T C A G A C T C G T A G A T C C T A G T C G A C T G A
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A A C G T A C G T A C G T A C G T

ONECUT1/MA0679.1/Jaspar

Match Rank:6
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AGAGAAMCCATACDRR
AAAAAATCGATAAT--
 C G T A T C A G G C T A C T A G T C G A T C G A G T C A G A T C G A T C G T C A G A C T C G T A G A T C C T A G T C G A C T G A
T G C A C T G A C G T A G C T A C T G A C T G A A C G T A G T C C T A G C G T A G A C T C G T A G C T A G A C T A C G T A C G T

ONECUT2/MA0756.1/Jaspar

Match Rank:7
Score:0.50
Offset:0
Orientation:forward strand
Alignment:AGAGAAMCCATACDRR
AAAAAATCGATAAT--
 C G T A T C A G G C T A C T A G T C G A T C G A G T C A G A T C G A T C G T C A G A C T C G T A G A T C C T A G T C G A C T G A
T C G A C T G A C G T A G C T A C T G A C T G A A C G T G T A C T C A G G C T A G C A T C G T A G C T A G C A T A C G T A C G T

ONECUT3/MA0757.1/Jaspar

Match Rank:8
Score:0.50
Offset:0
Orientation:forward strand
Alignment:AGAGAAMCCATACDRR
AAAAAATCAATAAT--
 C G T A T C A G G C T A C T A G T C G A T C G A G T C A G A T C G A T C G T C A G A C T C G T A G A T C C T A G T C G A C T G A
T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T A C G T A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:9
Score:0.50
Offset:-5
Orientation:reverse strand
Alignment:-----AGAGAAMCCATACDRR
GNNACCGAGAATNNN------
 A C G T A C G T A C G T A C G T A C G T C G T A T C A G G C T A C T A G T C G A T C G A G T C A G A T C G A T C G T C A G A C T C G T A G A T C C T A G T C G A C T G A
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:10
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---AGAGAAMCCATACDRR
GACAGAGATATCAGTGT--
 A C G T A C G T A C G T C G T A T C A G G C T A C T A G T C G A T C G A G T C A G A T C G A T C G T C A G A C T C G T A G A T C C T A G T C G A C T G A
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T A C G T A C G T