Information for 6-TGCCCAVAAAAAC (Motif 9)

A C G T A T C G A G T C A G T C A G T C C G T A T C G A G T C A C G T A C G T A C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A T G C G T C A
p-value:1e-11
log p-value:-2.557e+01
Information Content per bp:1.872
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.0 +/- 33.3bp
Average Position of motif in Background50.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TGCCCAVAAAAAC---
TGCCAAAATAAACANN
 A C G T A T C G A G T C A G T C A G T C C G T A T C G A G T C A C G T A C G T A C G T A C G T A A G T C A C G T A C G T A C G T
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

HOXB13/MA0901.1/Jaspar

Match Rank:2
Score:0.66
Offset:3
Orientation:forward strand
Alignment:TGCCCAVAAAAAC
---CCAATAAAAC
 A C G T A T C G A G T C A G T C A G T C C G T A T C G A G T C A C G T A C G T A C G T A C G T A A G T C
A C G T A C G T A C G T T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TGCCCAVAAAAAC
--CCYMATAAAA-
 A C G T A T C G A G T C A G T C A G T C C G T A T C G A G T C A C G T A C G T A C G T A C G T A A G T C
A C G T A C G T T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TGCCCAVAAAAAC
---CCAATAAAAA
 A C G T A T C G A G T C A G T C A G T C C G T A T C G A G T C A C G T A C G T A C G T A C G T A A G T C
A C G T A C G T A C G T T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A

HOXD13/MA0909.1/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TGCCCAVAAAAAC
---CCAATAAAAA
 A C G T A T C G A G T C A G T C A G T C C G T A T C G A G T C A C G T A C G T A C G T A C G T A A G T C
A C G T A C G T A C G T A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A

PH0057.1_Hoxb13/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TGCCCAVAAAAAC---
AACCCAATAAAATTCG
 A C G T A T C G A G T C A G T C A G T C C G T A T C G A G T C A C G T A C G T A C G T A C G T A A G T C A C G T A C G T A C G T
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G

PH0078.1_Hoxd13/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGCCCAVAAAAAC---
CTACCAATAAAATTCT
 A C G T A T C G A G T C A G T C A G T C C G T A T C G A G T C A C G T A C G T A C G T A C G T A A G T C A C G T A C G T A C G T
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGCCCAVAAAAAC
TGCCCAGNHW---
 A C G T A T C G A G T C A G T C A G T C C G T A T C G A G T C A C G T A C G T A C G T A C G T A A G T C
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T

PB0186.1_Tcf3_2/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGCCCAVAAAAAC--
AGCCGAAAAAAAAAT
 A C G T A T C G A G T C A G T C A G T C C G T A T C G A G T C A C G T A C G T A C G T A C G T A A G T C A C G T A C G T
C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T

PB0133.1_Hic1_2/Jaspar

Match Rank:10
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TGCCCAVAAAAAC
GGGTGTGCCCAAAAGG--
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C A G T C C G T A T C G A G T C A C G T A C G T A C G T A C G T A A G T C
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G A C G T A C G T