Information for 4-MWCAGTTCACTGY (Motif 6)

T G A C G C A T A G T C C G T A A C T G A C G T A C G T A G T C C G T A A G T C A C G T A C T G A G T C
Reverse Opposite:
C T A G A G T C C G T A A C T G A C G T C T A G C G T A G T C A A G T C A C G T A C T G C G T A A C G T
p-value:1e-13
log p-value:-2.997e+01
Information Content per bp:1.887
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.0 +/- 26.2bp
Average Position of motif in Background22.5 +/- 5.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MYBL1/MA0776.1/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:MWCAGTTCACTGY
-ACCGTTAACGGT
 T G A C G C A T A G T C C G T A A C T G A C G T A C G T A G T C C G T A A G T C A C G T A C T G A G T C
A C G T C T G A T G A C T A G C T C A G G A C T G C A T C G T A T C G A G T A C A T C G C A T G G A C T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:MWCAGTTCACTGY------
--AATCGCACTGCATTCCG
 T G A C G C A T A G T C C G T A A C T G A C G T A C G T A G T C C G T A A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

PB0005.1_Bbx_1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:MWCAGTTCACTGY----
--NANTTCATTGAATTA
 T G A C G C A T A G T C C G T A A C T G A C G T A C G T A G T C C G T A A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A

PB0081.1_Tcf1_1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--MWCAGTTCACTGY--
NNNTTAGTTAACTNANN
 A C G T A C G T T G A C G C A T A G T C C G T A A C T G A C G T A C G T A G T C C G T A A G T C A C G T A C T G A G T C A C G T A C G T
G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:MWCAGTTCACTGY
--AAGGTCAC---
 T G A C G C A T A G T C C G T A A C T G A C G T A C G T A G T C C G T A A G T C A C G T A C T G A G T C
A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:MWCAGTTCACTGY---
--NAGGTCANTGACCT
 T G A C G C A T A G T C C G T A A C T G A C G T A C G T A G T C C G T A A G T C A C G T A C T G A G T C A C G T A C G T A C G T
A C G T A C G T T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

PH0167.1_Tcf1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--MWCAGTTCACTGY--
NTTTTAGTTAACNNAGN
 A C G T A C G T T G A C G C A T A G T C C G T A A C T G A C G T A C G T A G T C C G T A A G T C A C G T A C T G A G T C A C G T A C G T
T G C A G A C T G C A T A C G T G A C T C T G A A T C G G C A T C G A T C G T A C T G A T A G C A G C T T C G A T G C A T A C G C T A G

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:MWCAGTTCACTGY
-TRAGGTCA----
 T G A C G C A T A G T C C G T A A C T G A C G T A C G T A G T C C G T A A G T C A C G T A C T G A G T C
A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-MWCAGTTCACTGY
BRRCVGTTDN----
 A C G T T G A C G C A T A G T C C G T A A C T G A C G T A C G T A G T C C G T A A G T C A C G T A C T G A G T C
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G A C G T A C G T A C G T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-MWCAGTTCACTGY--
AATCAATTCAATAATT
 A C G T T G A C G C A T A G T C C G T A A C T G A C G T A C G T A G T C C G T A A G T C A C G T A C T G A G T C A C G T A C G T
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T