Information for 3-TKTCWGYTCTGTCTAG (Motif 4)

A G C T A C G T A C G T T G A C C G T A A C T G A G T C G A C T A T G C C G A T A C T G A C G T A T G C A G C T C G T A A T C G
Reverse Opposite:
A T G C G C A T T C G A T A C G C G T A G T A C C G T A T A C G C T G A T C A G G T A C G C A T A C T G G T C A T G C A C T G A
p-value:1e-14
log p-value:-3.236e+01
Information Content per bp:1.678
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.95%
Number of Background Sequences with motif50.9
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets42.3 +/- 18.0bp
Average Position of motif in Background51.8 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)-1.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.60
Offset:8
Orientation:forward strand
Alignment:TKTCWGYTCTGTCTAG
--------CTGTCTGG
 A G C T A C G T A C G T T G A C C G T A A C T G A G T C G A C T A T G C C G A T A C T G A C G T A T G C A G C T C G T A A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TKTCWGYTCTGTCTAG-----
----NNTNNTGTCTGGNNTNG
 A G C T A C G T A C G T T G A C C G T A A C T G A G T C G A C T A T G C C G A T A C T G A C G T A T G C A G C T C G T A A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

SMAD3/MA0795.1/Jaspar

Match Rank:3
Score:0.57
Offset:9
Orientation:reverse strand
Alignment:TKTCWGYTCTGTCTAG---
---------TGTCTAGACG
 A G C T A C G T A C G T T G A C C G T A A C T G A G T C G A C T A T G C C G A T A C T G A C G T A T G C A G C T C G T A A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.56
Offset:7
Orientation:forward strand
Alignment:TKTCWGYTCTGTCTAG
-------GCTGTG---
 A G C T A C G T A C G T T G A C C G T A A C T G A G T C G A C T A T G C C G A T A C T G A C G T A T G C A G C T C G T A A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.55
Offset:6
Orientation:forward strand
Alignment:TKTCWGYTCTGTCTAG
------VBSYGTCTGG
 A G C T A C G T A C G T T G A C C G T A A C T G A G T C G A C T A T G C C G A T A C T G A C G T A T G C A G C T C G T A A T C G
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:6
Score:0.54
Offset:6
Orientation:forward strand
Alignment:TKTCWGYTCTGTCTAG--
------NYYTGTTTACHN
 A G C T A C G T A C G T T G A C C G T A A C T G A G T C G A C T A T G C C G A T A C T G A C G T A T G C A G C T C G T A A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C A G T C A C G T C T A G A C G T A C G T A C G T C G T A A G T C G A T C C G T A

FOXP2/MA0593.1/Jaspar

Match Rank:7
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:TKTCWGYTCTGTCTAG--
-------TNTGTTTACTT
 A G C T A C G T A C G T T G A C C G T A A C T G A G T C G A C T A T G C C G A T A C T G A C G T A T G C A G C T C G T A A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A G C T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C A T G A C T

Foxo1/MA0480.1/Jaspar

Match Rank:8
Score:0.54
Offset:6
Orientation:forward strand
Alignment:TKTCWGYTCTGTCTAG-
------TCCTGTTTACA
 A G C T A C G T A C G T T G A C C G T A A C T G A G T C G A C T A T G C C G A T A C T G A C G T A T G C A G C T C G T A A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A T G C A G T C A C G T A C T G A C G T A C G T A C G T G C T A A G T C G C T A

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:9
Score:0.53
Offset:8
Orientation:forward strand
Alignment:TKTCWGYTCTGTCTAG
--------CTGTTTAC
 A G C T A C G T A C G T T G A C C G T A A C T G A G T C G A C T A T G C C G A T A C T G A C G T A T G C A G C T C G T A A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G C T A C G T A C G T G T C A A G T C

FOXP1/MA0481.1/Jaspar

Match Rank:10
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:TKTCWGYTCTGTCTAG-----
------CTTTGTTTACTTTTN
 A G C T A C G T A C G T T G A C C G T A A C T G A G T C G A C T A T G C C G A T A C T G A C G T A T G C A G C T C G T A A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G