Information for 7-CCTCTAGTGS (Motif 34)

G A T C G T A C A C G T A T G C A G C T C T G A T A C G A G C T A C T G T A C G
Reverse Opposite:
A T G C T G A C C T G A A T G C G A C T T C G A A T C G G T C A C A T G C T A G
p-value:1e-6
log p-value:-1.543e+01
Information Content per bp:1.574
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif4.29%
Number of Background Sequences with motif745.5
Percentage of Background Sequences with motif1.52%
Average Position of motif in Targets49.7 +/- 27.8bp
Average Position of motif in Background50.0 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.67
Offset:-7
Orientation:forward strand
Alignment:-------CCTCTAGTGS---
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C G T A C A C G T A T G C A G C T C T G A T A C G A G C T A C T G T A C G A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------CCTCTAGTGS---
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C G T G A T C G T A C A C G T A T G C A G C T C T G A T A C G A G C T A C T G T A C G A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.60
Offset:-9
Orientation:forward strand
Alignment:---------CCTCTAGTGS-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C G T A C A C G T A T G C A G C T C T G A T A C G A G C T A C T G T A C G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

PH0111.1_Nkx2-2/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CCTCTAGTGS----
NANTTTCAAGTGGTTAN
 A C G T A C G T A C G T G A T C G T A C A C G T A T G C A G C T C T G A T A C G A G C T A C T G T A C G A C G T A C G T A C G T A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

HOXA5/MA0158.1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCTCTAGTGS
-CACTAATT-
 G A T C G T A C A C G T A T G C A G C T C T G A T A C G A G C T A C T G T A C G
A C G T G T A C C T G A A T G C C G A T C G T A C T G A A C G T A C G T A C G T

BARX1/MA0875.1/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CCTCTAGTGS-
---NTAATTGN
 G A T C G T A C A C G T A T G C A G C T C T G A T A C G A G C T A C T G T A C G A C G T
A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C

NKX2-8/MA0673.1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CCTCTAGTGS
-NTCAAGTGG
 G A T C G T A C A C G T A T G C A G C T C T G A T A C G A G C T A C T G T A C G
A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CCTCTAGTGS-
NNHTGTGGTTWN
 A C G T G A T C G T A C A C G T A T G C A G C T C T G A T A C G A G C T A C T G T A C G A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCTCTAGTGS
GCTGTGGTTT
 G A T C G T A C A C G T A T G C A G C T C T G A T A C G A G C T A C T G T A C G
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

TAL1::TCF3/MA0091.1/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CCTCTAGTGS
CGACCATCTGTT--
 A C G T A C G T A C G T A C G T G A T C G T A C A C G T A T G C A G C T C T G A T A C G A G C T A C T G T A C G
G T A C T A C G C T G A G T A C A T G C C G T A A C G T G T A C A C G T A C T G A C G T G A C T A C G T A C G T