Information for 11-CTAGACTGTGTCTATG (Motif 20)

A G T C G A C T C G T A A C T G C T G A A G T C A C G T A C T G C G A T A C T G A G C T A G T C A C G T C G T A A C G T A T C G
Reverse Opposite:
A T G C C G T A C G A T C G T A C T A G C T G A A G T C C G T A A G T C C G T A C T A G A G C T A G T C A C G T C G T A A C T G
p-value:1e-9
log p-value:-2.212e+01
Information Content per bp:1.907
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets36.2 +/- 23.8bp
Average Position of motif in Background69.7 +/- 11.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0016.1_Foxj1_1/Jaspar

Match Rank:1
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CTAGACTGTGTCTATG--
--NNNNTTTGTTTACNNT
 A G T C G A C T C G T A A C T G C T G A A G T C A C G T A C T G C G A T A C T G A G C T A G T C A C G T C G T A A C G T A T C G A C G T A C G T
A C G T A C G T G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.50
Offset:4
Orientation:forward strand
Alignment:CTAGACTGTGTCTATG
----GCTGTG------
 A G T C G A C T C G T A A C T G C T G A A G T C A C G T A C T G C G A T A C T G A G C T A G T C A C G T C G T A A C G T A T C G
A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CTAGACTGTGTCTATG
CCAGACAG--------
 A G T C G A C T C G T A A C T G C T G A A G T C A C G T A C T G C G A T A C T G A G C T A G T C A C G T C G T A A C G T A T C G
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.50
Offset:3
Orientation:forward strand
Alignment:CTAGACTGTGTCTATG
---GTCTGTGGTTT--
 A G T C G A C T C G T A A C T G C T G A A G T C A C G T A C T G C G A T A C T G A G C T A G T C A C G T C G T A A C G T A T C G
A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:5
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---CTAGACTGTGTCTATG
CGTCTAGACA---------
 A C G T A C G T A C G T A G T C G A C T C G T A A C T G C T G A A G T C A C G T A C T G C G A T A C T G A G C T A G T C A C G T C G T A A C G T A T C G
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:6
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:CTAGACTGTGTCTATG---
-------NTGTTTAYATWW
 A G T C G A C T C G T A A C T G C T G A A G T C A C G T A C T G C G A T A C T G A G C T A G T C A C G T C G T A A C G T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A

FOXL1/MA0033.2/Jaspar

Match Rank:7
Score:0.49
Offset:8
Orientation:reverse strand
Alignment:CTAGACTGTGTCTATG
--------TGTTTAC-
 A G T C G A C T C G T A A C T G C T G A A G T C A C G T A C T G C G A T A C T G A G C T A G T C A C G T C G T A A C G T A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T C T A G A C G T C A G T A C G T C T G A G A T C A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CTAGACTGTGTCTATG
BCAGACWA--------
 A G T C G A C T C G T A A C T G C T G A A G T C A C G T A C T G C G A T A C T G A G C T A G T C A C G T C G T A A C G T A T C G
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:9
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:CTAGACTGTGTCTATG----
-----CTTTGTTTACTTTTN
 A G T C G A C T C G T A A C T G C T G A A G T C A C G T A C T G C G A T A C T G A G C T A G T C A C G T C G T A A C G T A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:CTAGACTGTGTCTATG-
-----CTGTTGCTAGGS
 A G T C G A C T C G T A A C T G C T G A A G T C A C G T A C T G C G A T A C T G A G C T A G T C A C G T C G T A A C G T A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G