p-value: | 1e-10 |
log p-value: | -2.486e+01 |
Information Content per bp: | 1.847 |
Number of Target Sequences with motif | 12.0 |
Percentage of Target Sequences with motif | 1.56% |
Number of Background Sequences with motif | 46.0 |
Percentage of Background Sequences with motif | 0.09% |
Average Position of motif in Targets | 41.1 +/- 22.6bp |
Average Position of motif in Background | 51.8 +/- 23.8bp |
Strand Bias (log2 ratio + to - strand density) | 0.5 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 1 |
Score: | 0.78 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CCTGACCTCG --TGACCTYA |
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COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer
Match Rank: | 2 |
Score: | 0.78 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CCTGACCTCG --TGACCYCT |
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RORA/MA0071.1/Jaspar
Match Rank: | 3 |
Score: | 0.76 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CCTGACCTCG-- --TGACCTTGAT |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 4 |
Score: | 0.75 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CCTGACCTCG --TGACCT-- |
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Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer
Match Rank: | 5 |
Score: | 0.74 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CCTGACCTCG- -NTGACCTTGA |
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Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer
Match Rank: | 6 |
Score: | 0.73 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CCTGACCTCG- -CTGACCTTTG |
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PB0057.1_Rxra_1/Jaspar
Match Rank: | 7 |
Score: | 0.72 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CCTGACCTCG---- TGTCGTGACCCCTTAAT |
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Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer
Match Rank: | 8 |
Score: | 0.70 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CCTGACCTCG-- --TGACCTTGAV |
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NR4A2/MA0160.1/Jaspar
Match Rank: | 9 |
Score: | 0.70 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CCTGACCTCG -GTGACCTT- |
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SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer
Match Rank: | 10 |
Score: | 0.70 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CCTGACCTCG BNTGDCCTTG |
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