Information for 9-CATTTGATTA (Motif 9)

T A G C T G C A C G A T C A G T C G A T T C A G C T G A A C G T C G A T C G T A
Reverse Opposite:
A C G T C G T A T G C A G A C T A G T C C G T A G T C A C G T A A C G T A T C G
p-value:1e-11
log p-value:-2.578e+01
Information Content per bp:1.682
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif5.18%
Number of Background Sequences with motif595.1
Percentage of Background Sequences with motif1.33%
Average Position of motif in Targets54.2 +/- 21.5bp
Average Position of motif in Background51.4 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0016.1_Foxj1_1/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CATTTGATTA----
NNNNTTTGTTTACNNT
 A C G T A C G T T A G C T G C A C G A T C A G T C G A T T C A G C T G A A C G T C G A T C G T A A C G T A C G T A C G T A C G T
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T

PH0016.1_Cux1_1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CATTTGATTA-----
ACCGGTTGATCACCTGA
 A C G T A C G T T A G C T G C A C G A T C A G T C G A T T C A G C T G A A C G T C G A T C G T A A C G T A C G T A C G T A C G T A C G T
C T G A A T G C G A T C T C A G T C A G G A C T G C A T C T A G C T G A C G A T G A T C G C T A G T A C T A G C C G A T A T C G C T G A

Foxj3/MA0851.1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CATTTGATTA------
NNNTTTGTTTACNTTNN
 A C G T T A G C T G C A C G A T C A G T C G A T T C A G C T G A A C G T C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

PB0017.1_Foxj3_1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CATTTGATTA------
NNNTTTGTTTACNTTNN
 A C G T T A G C T G C A C G A T C A G T C G A T T C A G C T G A A C G T C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

DUXA/MA0884.1/Jaspar

Match Rank:5
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CATTTGATTA------
---NTGATTAAATTAN
 T A G C T G C A C G A T C A G T C G A T T C A G C T G A A C G T C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T G C A T T C A G T G C A A G C T A C G T T C G A T C G A C T G A A G C T G A C T C T G A C T A G

FOXG1/MA0613.1/Jaspar

Match Rank:6
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CATTTGATTA-
---TTGTTTAC
 T A G C T G C A C G A T C A G T C G A T T C A G C T G A A C G T C G A T C G T A A C G T
A C G T A C G T A C G T C G A T A C G T A C T G A C G T A C G T A C G T C G T A A G T C

PB0001.1_Arid3a_1/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CATTTGATTA-----
NNNTTTTAATTAANNNN
 A C G T A C G T T A G C T G C A C G A T C A G T C G A T T C A G C T G A A C G T C G A T C G T A A C G T A C G T A C G T A C G T A C G T
C T A G C G T A C G T A C A G T G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A T G A C T A G C A T G C

MNX1/MA0707.1/Jaspar

Match Rank:8
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CATTTGATTA--
--TTTAATTANN
 T A G C T G C A C G A T C A G T C G A T T C A G C T G A A C G T C G A T C G T A A C G T A C G T
A C G T A C G T C A G T G C A T A C G T G C T A C T G A A C G T C A G T T C G A A T G C G A T C

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:9
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CATTTGATTA
TAATTGATTA
 T A G C T G C A C G A T C A G T C G A T T C A G C T G A A C G T C G A T C G T A
C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A

Arid3a/MA0151.1/Jaspar

Match Rank:10
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CATTTGATTA
--TTTAAT--
 T A G C T G C A C G A T C A G T C G A T T C A G C T G A A C G T C G A T C G T A
A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T