Information for 4-CTGACTGACA (Motif 9)

T G A C A G C T T A C G C T G A A T G C C G A T A T C G G C T A G T A C G C T A
Reverse Opposite:
C G A T C A T G C G A T T A G C G C T A A T C G G A C T A T G C T C G A A C T G
p-value:1e-12
log p-value:-2.919e+01
Information Content per bp:1.592
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif4.47%
Number of Background Sequences with motif487.1
Percentage of Background Sequences with motif1.07%
Average Position of motif in Targets48.0 +/- 26.4bp
Average Position of motif in Background49.3 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CTGACTGACA--
BTGABTGACAGS
 T G A C A G C T T A C G C T G A A T G C C G A T A T C G G C T A G T A C G C T A A C G T A C G T
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CTGACTGACA--
NTGATTGACAGN
 T G A C A G C T T A C G C T G A A T G C C G A T A T C G G C T A G T A C G C T A A C G T A C G T
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CTGACTGACA
TGCTGAGTCA--
 A C G T A C G T T G A C A G C T T A C G C T G A A T G C C G A T A T C G G C T A G T A C G C T A
C G A T T A C G T G A C G A C T C A T G C G T A T A C G A C G T G T A C C T G A A C G T A C G T

FOSL1/MA0477.1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CTGACTGACA
NATGAGTCACC
 A C G T T G A C A G C T T A C G C T G A A T G C C G A T A T C G G C T A G T A C G C T A
A T G C T G C A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G T C G A T C

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:5
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTGACTGACA---
-TGAGTGACAGSC
 T G A C A G C T T A C G C T G A A T G C C G A T A T C G G C T A G T A C G C T A A C G T A C G T A C G T
A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CTGACTGACA--
--VGCTGWCAVB
 T G A C A G C T T A C G C T G A A T G C C G A T A T C G G C T A G T A C G C T A A C G T A C G T
A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

ESR2/MA0258.2/Jaspar

Match Rank:7
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CTGACTGACA-
AGGNCANNGTGACCT
 A C G T A C G T A C G T A C G T T G A C A G C T T A C G C T G A A T G C C G A T A T C G G C T A G T A C G C T A A C G T
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T

MEIS1/MA0498.2/Jaspar

Match Rank:8
Score:0.64
Offset:4
Orientation:forward strand
Alignment:CTGACTGACA-
----TTGACAG
 T G A C A G C T T A C G C T G A A T G C C G A T A T C G G C T A G T A C G C T A A C G T
A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G

JUNB/MA0490.1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTGACTGACA-
ATGAGTCATCN
 T G A C A G C T T A C G C T G A A T G C C G A T A T C G G C T A G T A C G C T A A C G T
T G C A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G C T G A T C G T A C

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CTGACTGACA
TGCTGACTCA--
 A C G T A C G T T G A C A G C T T A C G C T G A A T G C C G A T A T C G G C T A G T A C G C T A
G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T A C G T